Z. japonica Nagirizaki
Zjn_sc00047.1.g02160.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G18910.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 295 33 293 2e-90 99.7 56.3 69.5
Subject 294 47 293
Annot | Symbols: NIP1;2, NLM2, ATNLM2 | NOD26-like intrinsic protein 1;2 | chr4:10366211-10368179 FORWARD LENGTH=294
NR ref|XP_002453573.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 295 1 294 e-127 97.3 83.1 87.1
Subject 287 1 285
Annot hypothetical protein SORBIDRAFT_04g008360 [Sorghum bicolor] gi|241933404|gb|EES06549.1| hypothetical protein SORBIDRAFT_04g008360 [Sorghum bicolor]
IRGSP Os02t0232900-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 295 1 295 e-122 96.3 82 86.4
Subject 284 1 284
Annot
Sbicolor Sobic.004G102200.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 295 1 294 e-130 97.3 83.1 87.1
Subject 287 1 285
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00047.1.g02160.1.am.mk length: 295 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 2.5e-37 52-71
91-115
165-183
211-233
248-268
HMMPanther PTHR19139 AQUAPORIN 1.5e-126 11-293
HMMPfam PF00230 MIP 3.2e-44 53-265
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 109-117
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.7e-58 49-276
superfamily SSF81338 Aquaporin-like 4.9e-53 41-281
no_ID  
HMMPanther PTHR19139:SF22 NODULIN-26-RELATED 1.5e-126 11-293
Seg seg seg NA 130-139
252-264
Pseudomolecule
Chromosome Start End Strand
839141813916093+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00047.1 maker_non_over exon 1110329 1110487 . + . ID=Zjn_sc00047.1.g02160.1.am.mk:exon:1
Zjn_sc00047.1 maker_non_over exon 1111032 1111256 . + . ID=Zjn_sc00047.1.g02160.1.am.mk:exon:2
Zjn_sc00047.1 maker_non_over exon 1111281 1111454 . + . ID=Zjn_sc00047.1.g02160.1.am.mk:exon:3
Zjn_sc00047.1 maker_non_over exon 1111538 1111599 . + . ID=Zjn_sc00047.1.g02160.1.am.mk:exon:4
Zjn_sc00047.1 maker_non_over exon 1111849 1111893 . + . ID=Zjn_sc00047.1.g02160.1.am.mk:exon:5
Zjn_sc00047.1 maker_non_over exon 1112019 1112241 . + . ID=Zjn_sc00047.1.g02160.1.am.mk:exon:6

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