Z. japonica Nagirizaki
Zjn_sc00047.1.g02000.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G30970.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 24 405 0.0 105.7 76.9 85.5
Subject 430 27 428
Annot | Symbols: ASP1 | aspartate aminotransferase 1 | chr2:13179012-13181686 FORWARD LENGTH=430
NR emb|CAA45024.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 1 405 0.0 105.2 90.7 93.9
Subject 428 1 428
Annot aspartate aminotransferase [Panicum miliaceum] gi|435459|dbj|BAA04993.1| aspartate aminotransferase [Panicum miliaceum]
IRGSP Os06t0548000-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 23 405 0.0 113.8 85.7 89.7
Subject 463 59 461
Annot
Sbicolor Sobic.004G104700.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 16 407 0.0 105.7 87.2 90.9
Subject 430 18 430
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00047.1.g02000.1.sm.mkhc length: 407 aa.
IPR000796 Aspartate/other aminotransferase
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0008483 transaminase activity    
FPrintScan PR00799 TRANSAMINASE 4.6e-25 202-221
233-245
301-326
376-394
HMMPanther PTHR11879 ASPARTATE 1.5e-237 1-407
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 271-284
IPR004839 Aminotransferase, class I/classII
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 4.3e-80 55-400
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 9.8e-99 73-312
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 1.4e-36 313-404
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 9.1e-107 25-405
no_ID  
HMMPanther PTHR11879:SF0 SUBFAMILY 1.5e-237 1-407
Pseudomolecule
Chromosome Start End Strand
838320443835686-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00047.1 maker exon 1028192 1028590 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:10
Zjn_sc00047.1 maker exon 1028699 1028793 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:9
Zjn_sc00047.1 maker exon 1029024 1029119 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:8
Zjn_sc00047.1 maker exon 1029288 1029387 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:7
Zjn_sc00047.1 maker exon 1030051 1030223 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:6
Zjn_sc00047.1 maker exon 1030313 1030417 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:5
Zjn_sc00047.1 maker exon 1030741 1030846 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:4
Zjn_sc00047.1 maker exon 1031104 1031310 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:3
Zjn_sc00047.1 maker exon 1031458 1031543 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:2
Zjn_sc00047.1 maker exon 1031652 1031834 . - . ID=Zjn_sc00047.1.g02000.1.sm.mkhc:exon:1

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