Z. japonica Nagirizaki
Zjn_sc00047.1.g01700.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR ref|XP_010233742.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 64 415 8e-85 74.4 36.2 42.9
Subject 392 11 368
Annot PREDICTED: putative F-box protein At3g16210 [Brachypodium distachyon]
IRGSP Os02t0249700-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 62 405 8e-73 83.3 32.6 41
Subject 439 6 358
Annot
Sbicolor Sobic.009G111800.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 56 403 4e-69 81.2 31.5 40.8
Subject 428 32 398
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00047.1.g01700.1.am.mk length: 527 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00256 A 2.1 68-108
445-485
superfamily SSF81383 F-box 1.4e-08 55-152
433-485
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 2.9e-05 68-103
445-484
HMMPfam PF12937 F-box-like 1.3e-05 68-105
445-484
Seg seg seg NA 52-64
75-90
96-119
435-467
Pseudomolecule
Chromosome Start End Strand
836771723681967+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00047.1 maker_non_over exon 873320 874530 . + . ID=Zjn_sc00047.1.g01700.1.am.mk:exon:1
Zjn_sc00047.1 maker_non_over exon 877092 877336 . + . ID=Zjn_sc00047.1.g01700.1.am.mk:exon:2
Zjn_sc00047.1 maker_non_over exon 877988 878115 . + . ID=Zjn_sc00047.1.g01700.1.am.mk:exon:3

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