Z. japonica Nagirizaki
Zjn_sc00045.1.g03690.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR ref|XP_004951844.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 410 30 385 e-137 122.2 66.8 73.7
Subject 501 29 391
Annot PREDICTED: F-box protein At5g03100-like [Setaria italica]
IRGSP Os02t0160200-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 410 12 378 e-132 120.7 68.3 74.6
Subject 495 1 377
Annot
Sbicolor Sobic.004G049100.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 410 20 378 e-136 122.2 66.6 71.7
Subject 501 7 384
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00045.1.g03690.1.sm.mkhc length: 410 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 3.9e-05 31-74
superfamily SSF81383 F-box 2.5e-09 27-66
no_ID  
Gene3D G3DSA:3.80.10.10 no description 9.8e-21 171-375
HMMPanther PTHR10706 F-BOX 5.3e-51 4-375
HMMPanther PTHR10706:SF73 F-BOX 5.3e-51 4-375
Seg seg seg NA 20-27
73-84
137-154
212-226
superfamily SSF52047 RNI-like 5.5e-12 170-374
Pseudomolecule
Chromosome Start End Strand
7990016994258+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00045.1 maker exon 1648368 1648448 . - . ID=Zjn_sc00045.1.g03690.1.sm.mkhc:exon:5
Zjn_sc00045.1 maker exon 1649855 1649873 . - . ID=Zjn_sc00045.1.g03690.1.sm.mkhc:exon:4
Zjn_sc00045.1 maker exon 1649948 1649958 . - . ID=Zjn_sc00045.1.g03690.1.sm.mkhc:exon:3
Zjn_sc00045.1 maker exon 1651411 1651553 . - . ID=Zjn_sc00045.1.g03690.1.sm.mkhc:exon:2
Zjn_sc00045.1 maker exon 1651632 1652610 . - . ID=Zjn_sc00045.1.g03690.1.sm.mkhc:exon:1

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