Z. japonica Nagirizaki
Zjn_sc00045.1.g03190.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G16300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 4 359 e-151 116.3 75.9 86.1
Subject 420 3 418
Annot | Symbols: GAPCP-2 | glyceraldehyde-3-phosphate dehydrogenase of plastid 2 | chr1:5574433-5577406 FORWARD LENGTH=420
NR ref|NP_001149357.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 1 361 0.0 113.9 91.7 95.6
Subject 411 1 411
Annot LOC100282981 [Zea mays] gi|195626622|gb|ACG35141.1| glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Zea mays] gi|195641440|gb|ACG40188.1| glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Zea mays] gi|413935741|gb|AFW70292.1| glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Zea mays]
IRGSP Os02t0171100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 22 361 e-177 113.9 87 90
Subject 411 25 411
Annot
Sbicolor Sobic.004G056400.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 1 361 0.0 114.4 91.7 95
Subject 413 1 413
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00045.1.g03190.1.sm.mkhc length: 361 aa.
IPR016040 NAD(P)-binding domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.720 no description 1.1e-45 74-180
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00044 Gp_dh_N 1.9e-41 76-185
HMMSmart SM00846 Glyceraldehyde 3.2e-59 75-195
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02800 Gp_dh_C 2.2e-71 184-337
IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00078 G3PDHDRGNASE 1.7e-28 138-151
196-212
253-270
293-308
HMMPanther PTHR10836 GLYCERALDEHYDE 1.8e-215 55-358
no_ID  
Gene3D G3DSA:3.30.360.10 no description 1.3e-75 181-339
Seg seg seg NA 10-21
199-211
superfamily SSF51735 NAD(P)-binding 3.6e-47 75-197
superfamily SSF55347 Glyceraldehyde-3-phosphate 1.4e-75 175-338
Pseudomolecule
Chromosome Start End Strand
711850461188946+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00045.1 maker exon 1453680 1454161 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:13
Zjn_sc00045.1 maker exon 1454249 1454338 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:12
Zjn_sc00045.1 maker exon 1454420 1454503 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:11
Zjn_sc00045.1 maker exon 1454720 1454862 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:10
Zjn_sc00045.1 maker exon 1454939 1455036 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:9
Zjn_sc00045.1 maker exon 1455111 1455171 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:8
Zjn_sc00045.1 maker exon 1455548 1455647 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:7
Zjn_sc00045.1 maker exon 1455845 1455957 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:6
Zjn_sc00045.1 maker exon 1456390 1456490 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:5
Zjn_sc00045.1 maker exon 1456715 1456753 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:4
Zjn_sc00045.1 maker exon 1456846 1456898 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:3
Zjn_sc00045.1 maker exon 1457000 1457073 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:2
Zjn_sc00045.1 maker exon 1457506 1457580 . - . ID=Zjn_sc00045.1.g03190.1.sm.mkhc:exon:1

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