Z. japonica Nagirizaki
Zjn_sc00045.1.g01630.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G45140.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 808 78 713 0.0 110.9 45.8 58
Subject 896 121 772
Annot | Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896
NR gb|ABF01002.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 808 1 713 0.0 112.7 72.3 79.3
Subject 911 1 785
Annot lipoxygenase [Zea mays] gi|413936225|gb|AFW70776.1| lipoxygenase [Zea mays]
IRGSP Os02t0194700-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 808 71 713 0.0 114.6 61.3 69.3
Subject 926 128 802
Annot
Sbicolor Sobic.004G078600.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 808 1 713 0.0 113.5 71.8 79.7
Subject 917 1 793
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00045.1.g01630.1.am.mk length: 808 aa.
IPR000907 Lipoxygenase
method AccNumber shortName E-value location
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11771 LIPOXYGENASE 0 35-713
IPR001024 PLAT/LH2 domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.60.60.20 no description 1.3e-33 87-169
HMMPfam PF01477 PLAT 1e-12 83-155
HMMSmart SM00308 Lipoxygenase 1.7e-13 40-157
ProfileScan PS50095 PLAT 17.817 38-156
IPR001246 Lipoxygenase, plant
Molecular Function GO:0005506 iron ion binding    
Molecular Function GO:0016165 lipoxygenase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00468 PLTLPOXGNASE 1.3e-55 126-144
152-173
191-207
224-243
289-310
336-352
375-394
443-467
IPR008976 Lipase/lipooxygenase, PLAT/LH2
superfamily SSF49723 Lipase/lipooxygenase 8.7e-27 91-160
IPR013819 Lipoxygenase, C-terminal
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00087 LIPOXYGENASE 5.6e-20 488-505
506-523
526-546
HMMPfam PF00305 Lipoxygenase 6.5e-218 168-716
ProfileScan PS51393 LIPOXYGENASE_3 221.764 159-808
superfamily SSF48484 Lipoxigenase 1.6e-209 161-713
IPR020833 Lipoxygenase, iron binding site
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00711 LIPOXYGENASE_1 NA 506-520
IPR020834 Lipoxygenase, conserved site
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00081 LIPOXYGENASE_2 NA 533-543
IPR027433 Lipoxygenase, domain 3
Gene3D G3DSA:4.10.372.10 no description 8.8e-24 277-367
no_ID  
Gene3D G3DSA:1.20.245.10 no description 4.9e-88 504-714
Gene3D G3DSA:3.10.450.60 no description 3.5e-47 369-502
Gene3D G3DSA:4.10.375.10 no description 4e-42 170-259
HMMPanther PTHR11771:SF2 LIPOXYGENASE 0 35-713
Seg seg seg NA 56-67
748-758
778-794
Pseudomolecule
Chromosome Start End Strand
718855281890765-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00045.1 maker_non_over exon 751861 752070 . + . ID=Zjn_sc00045.1.g01630.1.am.mk:exon:1
Zjn_sc00045.1 maker_non_over exon 752557 752820 . + . ID=Zjn_sc00045.1.g01630.1.am.mk:exon:2
Zjn_sc00045.1 maker_non_over exon 752964 753525 . + . ID=Zjn_sc00045.1.g01630.1.am.mk:exon:3
Zjn_sc00045.1 maker_non_over exon 753682 754526 . + . ID=Zjn_sc00045.1.g01630.1.am.mk:exon:4
Zjn_sc00045.1 maker_non_over exon 754569 754826 . + . ID=Zjn_sc00045.1.g01630.1.am.mk:exon:5
Zjn_sc00045.1 maker_non_over exon 756811 757098 . + . ID=Zjn_sc00045.1.g01630.1.am.mk:exon:6

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