Z. japonica Nagirizaki
Zjn_sc00044.1.g05430.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37090.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 355 23 349 4e-54 98.9 34.1 54.1
Subject 351 6 341
Annot | Symbols: IRX9 | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:15587671-15589223 REVERSE LENGTH=351
NR ref|XP_002463447.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 355 1 354 e-107 106.2 69 76.9
Subject 377 1 377
Annot hypothetical protein SORBIDRAFT_02g044020 [Sorghum bicolor] gi|241926824|gb|EER99968.1| hypothetical protein SORBIDRAFT_02g044020 [Sorghum bicolor]
IRGSP Os07t0694400-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 355 11 353 5e-81 95.2 52.4 64.8
Subject 338 3 338
Annot
Sbicolor Sobic.002G430700.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 355 1 354 e-110 106.2 69 76.9
Subject 377 1 377
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00044.1.g05430.1.sm.mkhc length: 355 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 5e-94 10-352
HMMPfam PF03360 Glyco_transf_43 8.9e-29 136-351
no_ID  
Gene3D G3DSA:3.90.550.10 no description 1.8e-48 112-351
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 5e-94 10-352
Seg seg seg NA 20-36
39-50
58-70
99-109
153-167
superfamily SSF53448 Nucleotide-diphospho-sugar 6.3e-45 112-353
Pseudomolecule
Chromosome Start End Strand
381880368189893-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00044.1 maker exon 2217570 2218203 . - . ID=Zjn_sc00044.1.g05430.1.sm.mkhc:exon:2
Zjn_sc00044.1 maker exon 2218745 2219427 . - . ID=Zjn_sc00044.1.g05430.1.sm.mkhc:exon:1

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