Z. japonica Nagirizaki
Zjn_sc00044.1.g05360.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G33070.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 573 188 427 e-104 105.9 33 36.5
Subject 607 5 259
Annot | Symbols: | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr4:15952519-15954676 REVERSE LENGTH=607
NR gb|EMT10366.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 573 188 573 0.0 70.9 56 60
Subject 406 5 406
Annot Pyruvate decarboxylase isozyme 2 [Aegilops tauschii]
IRGSP Os03t0293500-02_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 573 204 427 e-111 105.6 34 37
Subject 605 22 258
Annot
Sbicolor Sobic.001G405500.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 573 187 427 e-112 106.5 35.1 38.2
Subject 610 4 262
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00044.1.g05360.1.am.mk length: 573 aa.
IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030976 thiamine pyrophosphate binding    
HMMPfam PF02775 TPP_enzyme_C 1.2e-10 428-544
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
Molecular Function GO:0030976 thiamine pyrophosphate binding    
HMMPfam PF02776 TPP_enzyme_N 9.2e-38 226-393
IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme
HMMPanther PTHR18968:SF4 PYRUVATE 1.1e-118 224-573
no_ID  
Gene3D G3DSA:3.40.50.970 no description 4.5e-33 225-404
427-559
HMMPanther PTHR18968 THIAMINE 1.1e-118 224-573
Seg seg seg NA 275-290
521-534
superfamily SSF52518 Thiamin 1.1e-28 224-409
403-573
Pseudomolecule
Chromosome Start End Strand
381644778168177+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00044.1 maker_non_over exon 2194011 2194234 . + . ID=Zjn_sc00044.1.g05360.1.am.mk:exon:1
Zjn_sc00044.1 maker_non_over exon 2194305 2194640 . + . ID=Zjn_sc00044.1.g05360.1.am.mk:exon:2
Zjn_sc00044.1 maker_non_over exon 2195701 2196352 . + . ID=Zjn_sc00044.1.g05360.1.am.mk:exon:3
Zjn_sc00044.1 maker_non_over exon 2196389 2196461 . + . ID=Zjn_sc00044.1.g05360.1.am.mk:exon:4
Zjn_sc00044.1 maker_non_over exon 2197176 2197252 . + . ID=Zjn_sc00044.1.g05360.1.am.mk:exon:5
Zjn_sc00044.1 maker_non_over exon 2197352 2197711 . + . ID=Zjn_sc00044.1.g05360.1.am.mk:exon:6

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