Z. japonica Nagirizaki
Zjn_sc00044.1.g02640.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G28910.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 1 286 1e-79 105.2 52.1 62.9
Subject 323 1 306
Annot | Symbols: ATMYB30, MYB30 | myb domain protein 30 | chr3:10911443-10912856 FORWARD LENGTH=323
NR ref|XP_004958408.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 1 307 e-132 103.6 85.7 88.6
Subject 318 1 318
Annot PREDICTED: myb-related protein 306-like [Setaria italica]
IRGSP Os08t0437300-00_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 1 219 4e-77 85.3 47.2 53.4
Subject 262 1 210
Annot
Sbicolor Sobic.001G356000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 1 303 9e-76 103.9 54.1 63.5
Subject 319 1 314
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00044.1.g02640.1.sm.mkhc length: 307 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 8e-14 14-61
67-112
HMMSmart SM00717 SANT 3.2e-16 13-63
66-114
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2e-23 5-64
65-116
superfamily SSF46689 Homeodomain-like 2.7e-26 14-113
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 20.609 9-65
66-116
no_ID  
HMMPanther PTHR10641 MYB-LIKE 2.9e-86 1-136
HMMPanther PTHR10641:SF30 MYB 2.9e-86 1-136
Seg seg seg NA 174-204
220-238
Pseudomolecule
Chromosome Start End Strand
370413387042838-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00044.1 maker exon 1070872 1071853 . - . ID=Zjn_sc00044.1.g02640.1.sm.mkhc:exon:3
Zjn_sc00044.1 maker exon 1071955 1072084 . - . ID=Zjn_sc00044.1.g02640.1.sm.mkhc:exon:2
Zjn_sc00044.1 maker exon 1072236 1072372 . - . ID=Zjn_sc00044.1.g02640.1.sm.mkhc:exon:1

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