Z. japonica Nagirizaki
Zjn_sc00044.1.g02460.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G64860.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
329 |
29 |
329 |
e-130 |
175.1 |
65 |
77.5 |
| Subject |
576 |
262 |
576 |
|
| Annot |
| Symbols: DPE1 | disproportionating enzyme | chr5:25925373-25928788 REVERSE LENGTH=576 |
| NR |
ref|XP_002461064.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
329 |
29 |
328 |
e-163 |
179.3 |
85.1 |
88.4 |
| Subject |
590 |
276 |
589 |
|
| Annot |
hypothetical protein SORBIDRAFT_02g040000 [Sorghum bicolor] gi|241924441|gb|EER97585.1| hypothetical protein SORBIDRAFT_02g040000 [Sorghum bicolor] |
| IRGSP |
Os07t0627000-01_chr07_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
329 |
29 |
329 |
e-164 |
180.5 |
84.5 |
86.9 |
| Subject |
594 |
280 |
594 |
|
| Annot |
|
| Sbicolor |
Sobic.002G383700.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
329 |
29 |
328 |
e-167 |
179.3 |
85.4 |
88.8 |
| Subject |
590 |
276 |
589 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00044.1.g02460.1.sm.mkhc |
length: 329 aa. |
| IPR003385 |
Glycoside hydrolase, family 77 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004134 |
4-alpha-glucanotransferase activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF02446 |
Glyco_hydro_77 |
9.9e-96 |
9-324 |
| HMMTigr |
TIGR00217 |
malQ: |
1.3e-61 |
6-327 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
3.8e-107 |
16-328 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
1.2e-110 |
7-329 |
| no_ID |
|
| HMMPanther |
PTHR32438 |
FAMILY |
1.3e-91 |
23-321 |
| HMMPanther |
PTHR32438:SF0 |
SUBFAMILY |
1.3e-91 |
23-321 |
| Seg |
seg |
seg |
NA |
315-325 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 3 | 6994020 | 6998242 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00044.1 |
maker |
exon |
1023554 |
1023616 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:1 |
| Zjn_sc00044.1 |
maker |
exon |
1023899 |
1023959 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:2 |
| Zjn_sc00044.1 |
maker |
exon |
1024909 |
1025067 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:3 |
| Zjn_sc00044.1 |
maker |
exon |
1025157 |
1025233 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:4 |
| Zjn_sc00044.1 |
maker |
exon |
1025318 |
1025447 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:5 |
| Zjn_sc00044.1 |
maker |
exon |
1026059 |
1026133 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:6 |
| Zjn_sc00044.1 |
maker |
exon |
1026425 |
1026497 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:7 |
| Zjn_sc00044.1 |
maker |
exon |
1026601 |
1026689 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:8 |
| Zjn_sc00044.1 |
maker |
exon |
1026796 |
1026840 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:9 |
| Zjn_sc00044.1 |
maker |
exon |
1026933 |
1027085 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:10 |
| Zjn_sc00044.1 |
maker |
exon |
1027161 |
1027776 |
. |
+ |
. |
ID=Zjn_sc00044.1.g02460.1.sm.mkhc:exon:11 |