Z. japonica Nagirizaki
Zjn_sc00044.1.g02110.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G22410.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 535 77 525 0.0 98.5 70.5 77.4
Subject 527 73 521
Annot | Symbols: | Class-II DAHP synthetase family protein | chr1:7912120-7914742 FORWARD LENGTH=527
NR ref|XP_004958355.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 535 21 535 0.0 100.9 83.4 88.4
Subject 540 23 538
Annot PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [Setaria italica]
IRGSP Os07t0622200-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 535 1 534 0.0 100.4 84.3 90.8
Subject 537 1 533
Annot
Sbicolor Sobic.002G379600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 535 1 534 0.0 100.9 85.8 91
Subject 540 1 536
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00044.1.g02110.1.am.mkhc length: 535 aa.
IPR002480 DAHP synthetase, class II
method AccNumber shortName E-value location
Molecular Function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
HMMPanther PTHR21337 PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE 1.7e-292 18-535
HMMPfam PF01474 DAHP_synth_2 3.7e-199 78-515
HMMTigr TIGR01358 DAHP_synth_II: 1.3e-227 79-522
no_ID  
HMMPanther PTHR21337:SF0 SUBFAMILY 1.7e-292 18-535
Seg seg seg NA 2-20
49-67
117-131
superfamily SSF51569 Aldolase 2.3e-198 56-520
Pseudomolecule
Chromosome Start End Strand
368453826848788-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00044.1 maker exon 874916 875612 . - . ID=Zjn_sc00044.1.g02110.1.am.mkhc:exon:6
Zjn_sc00044.1 maker exon 875773 876018 . - . ID=Zjn_sc00044.1.g02110.1.am.mkhc:exon:5
Zjn_sc00044.1 maker exon 876133 876409 . - . ID=Zjn_sc00044.1.g02110.1.am.mkhc:exon:4
Zjn_sc00044.1 maker exon 877307 877584 . - . ID=Zjn_sc00044.1.g02110.1.am.mkhc:exon:3
Zjn_sc00044.1 maker exon 877694 878249 . - . ID=Zjn_sc00044.1.g02110.1.am.mkhc:exon:2
Zjn_sc00044.1 maker exon 878279 878322 . - . ID=Zjn_sc00044.1.g02110.1.am.mkhc:exon:1

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