Z. japonica Nagirizaki
Zjn_sc00044.1.g01300.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G02230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 421 66 406 0.0 84.8 71.7 76
Subject 357 14 354
Annot | Symbols: RGP1, ATRGP1 | reversibly glycosylated polypeptide 1 | chr3:415463-417304 FORWARD LENGTH=357
NR ref|XP_002460988.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 421 67 410 0.0 85.7 78.9 80.3
Subject 361 9 352
Annot hypothetical protein SORBIDRAFT_02g038770 [Sorghum bicolor] gi|241924365|gb|EER97509.1| hypothetical protein SORBIDRAFT_02g038770 [Sorghum bicolor]
IRGSP Os07t0604800-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 421 67 420 0.0 86.9 77.4 80
Subject 366 13 366
Annot
Sbicolor Sobic.002G368600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 421 67 410 0.0 85.7 78.9 80.3
Subject 361 9 352
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00044.1.g01300.1.sm.mkhc length: 421 aa.
IPR004901 Reversibly glycosylated polypeptide family
method AccNumber shortName E-value location
Molecular Function GO:0016866 intramolecular transferase activity    
Biological Process GO:0030244 cellulose biosynthetic process    
HMMPfam PF03214 RGP 1.6e-174 70-405
no_ID  
HMMPanther PTHR31682 FAMILY 2.7e-248 56-416
HMMPanther PTHR31682:SF0 SUBFAMILY 2.7e-248 56-416
Seg seg seg NA 2-12
32-49
superfamily SSF53448 Nucleotide-diphospho-sugar 4.1e-06 70-278
Pseudomolecule
Chromosome Start End Strand
364918666495992+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00044.1 maker exon 521400 521972 . + . ID=Zjn_sc00044.1.g01300.1.sm.mkhc:exon:1
Zjn_sc00044.1 maker exon 524311 524561 . + . ID=Zjn_sc00044.1.g01300.1.sm.mkhc:exon:2
Zjn_sc00044.1 maker exon 524658 524826 . + . ID=Zjn_sc00044.1.g01300.1.sm.mkhc:exon:3
Zjn_sc00044.1 maker exon 524969 525526 . + . ID=Zjn_sc00044.1.g01300.1.sm.mkhc:exon:4

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