Z. japonica Nagirizaki
Zjn_sc00043.1.g05040.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G01720.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 279 5 168 9e-52 103.6 35.5 43.7
Subject 289 1 158
Annot | Symbols: ATAF1, ANAC002 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:268471-269514 FORWARD LENGTH=289
NR emb|CDM82556.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 279 9 218 5e-74 110.4 52.3 58.1
Subject 308 10 226
Annot unnamed protein product [Triticum aestivum]
IRGSP Os07t0566500-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 279 6 164 4e-53 152.3 37.3 43.7
Subject 425 24 196
Annot
Sbicolor Sobic.003G001700.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 279 9 169 4e-73 126.9 46.6 49.8
Subject 354 22 183
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00043.1.g05040.1.sm.mk length: 279 aa.
IPR003441 NAC domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02365 NAM 4.5e-42 11-137
ProfileScan PS51005 NAC 48.530 8-168
superfamily SSF101941 NAC 8.5e-49 7-169
no_ID  
HMMPanther PTHR31719 FAMILY 1.3e-86 1-168
Seg seg seg NA 30-42
Pseudomolecule
Chromosome Start End Strand
56749268412+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00043.1 maker_non_over exon 2301651 2302324 . - . ID=Zjn_sc00043.1.g05040.1.sm.mk:exon:2
Zjn_sc00043.1 maker_non_over exon 2302406 2302571 . - . ID=Zjn_sc00043.1.g05040.1.sm.mk:exon:1

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