Z. japonica Nagirizaki
Zjn_sc00043.1.g04440.1.am.mk
Sequence
-
BLAST
| TAIR10 |
AT2G46110.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
297 |
28 |
294 |
e-125 |
116.8 |
72.7 |
81.5 |
| Subject |
347 |
6 |
272 |
|
| Annot |
| Symbols: PANB1, KPHMT1 | ketopantoate hydroxymethyltransferase 1 | chr2:18954807-18956411 REVERSE LENGTH=347 |
| NR |
ref|XP_004967461.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
297 |
29 |
294 |
e-134 |
117.2 |
84.8 |
87.2 |
| Subject |
348 |
1 |
268 |
|
| Annot |
PREDICTED: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial [Setaria italica] |
| IRGSP |
Os01t0225500-00_chr01_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
297 |
31 |
294 |
e-105 |
134.3 |
68 |
77.1 |
| Subject |
399 |
44 |
313 |
|
| Annot |
|
| Sbicolor |
Sobic.003G011800.1.p|Chr03|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
297 |
40 |
294 |
e-133 |
118.9 |
82.2 |
84.2 |
| Subject |
353 |
17 |
273 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00043.1.g04440.1.am.mk |
length: 297 aa. |
| IPR003700 |
Ketopantoate hydroxymethyltransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003864 |
3-methyl-2-oxobutanoate hydroxymethyltransferase activity |
|
|
| Biological Process |
GO:0015940 |
pantothenate biosynthetic process |
|
|
| HAMAP |
MF_00156 |
PanB |
32.617 |
64-292 |
| HMMPIR |
PIRSF000388 |
3-methyl-2-oxobutanoate |
2.4e-98 |
53-296 |
| HMMPanther |
PTHR20881 |
3-METHYL-2-OXOBUTANOATE |
3.5e-134 |
24-284 |
| HMMPfam |
PF02548 |
Pantoate_transf |
9.1e-92 |
62-291 |
| HMMTigr |
TIGR00222 |
panB: |
4.8e-77 |
66-291 |
| IPR015813 |
Pyruvate/Phosphoenolpyruvate kinase-like domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.20.20.60 |
no description |
2.4e-100 |
62-291 |
| superfamily |
SSF51621 |
Phosphoenolpyruvate/pyruvate |
6.8e-84 |
63-292 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 5 | 291042 | 293004 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00043.1 |
maker_non_over |
exon |
2077059 |
2077130 |
. |
- |
. |
ID=Zjn_sc00043.1.g04440.1.am.mk:exon:4 |
| Zjn_sc00043.1 |
maker_non_over |
exon |
2077481 |
2077627 |
. |
- |
. |
ID=Zjn_sc00043.1.g04440.1.am.mk:exon:3 |
| Zjn_sc00043.1 |
maker_non_over |
exon |
2077713 |
2077919 |
. |
- |
. |
ID=Zjn_sc00043.1.g04440.1.am.mk:exon:2 |
| Zjn_sc00043.1 |
maker_non_over |
exon |
2078554 |
2079021 |
. |
- |
. |
ID=Zjn_sc00043.1.g04440.1.am.mk:exon:1 |