Z. japonica Nagirizaki
Zjn_sc00043.1.g03320.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37690.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 448 3 448 0.0 143.3 68.1 81.9
Subject 642 187 641
Annot | Symbols: | phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative | chr2:15806111-15810240 FORWARD LENGTH=642
NR ref|XP_006645610.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 448 1 448 0.0 130.8 85.5 91.7
Subject 586 124 581
Annot PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Oryza brachyantha]
IRGSP Os01t0199900-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 448 1 446 0.0 140.8 84.2 91.1
Subject 631 166 623
Annot
Sbicolor Sobic.003G028600.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 448 1 448 0.0 142.2 84.6 91.7
Subject 637 177 634
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00043.1.g03320.1.sm.mkhc length: 448 aa.
IPR000031 N5-carboxyaminoimidazole ribonucleotide mutase PurE domain
method AccNumber shortName E-value location
Biological Process GO:0006189 'de novo' IMP biosynthetic process    
Molecular Function GO:0034023 5-(carboxyamino)imidazole ribonucleotide mutase activity    
Gene3D G3DSA:3.40.50.7700 no description 1.6e-61 285-439
HMMPfam PF00731 AIRC 5.3e-55 292-431
HMMSmart SM01001 AIR 3.2e-83 292-431
HMMTigr TIGR01162 purE: 2.2e-55 294-438
superfamily SSF52255 N5-CAIR 1.2e-53 292-448
IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
HMMPfam PF02222 ATP-grasp 2e-59 14-185
IPR011054 Rudiment single hybrid motif
superfamily SSF51246 Rudiment 3.5e-15 209-286
IPR011761 ATP-grasp fold
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0046872 metal ion binding    
ProfileScan PS50975 ATP_GRASP 45.213 10-198
IPR013815 ATP-grasp fold, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.1490.20 no description 1.3e-05 3-57
IPR013816 ATP-grasp fold, subdomain 2
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.470.20 no description 9e-81 58-283
no_ID  
HMMPanther PTHR23047 PHOSPHORIBOSYLAMINOIMIDAZOLE 4.5e-185 1-395
HMMPanther PTHR23047:SF1 PHOSPHORIBOSYLAMINOIMIDAZOLE 4.5e-185 1-395
superfamily SSF56059 Glutathione 2.1e-58 5-207
Pseudomolecule
Chromosome Start End Strand
5763304769449-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00043.1 maker exon 1600614 1600670 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:1
Zjn_sc00043.1 maker exon 1600762 1600873 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:2
Zjn_sc00043.1 maker exon 1601286 1601348 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:3
Zjn_sc00043.1 maker exon 1601428 1601566 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:4
Zjn_sc00043.1 maker exon 1601735 1601790 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:5
Zjn_sc00043.1 maker exon 1602163 1602236 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:6
Zjn_sc00043.1 maker exon 1602343 1602490 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:7
Zjn_sc00043.1 maker exon 1602578 1602751 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:8
Zjn_sc00043.1 maker exon 1602918 1603005 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:9
Zjn_sc00043.1 maker exon 1603086 1603199 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:10
Zjn_sc00043.1 maker exon 1603835 1603932 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:11
Zjn_sc00043.1 maker exon 1604031 1604121 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:12
Zjn_sc00043.1 maker exon 1604532 1604623 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:13
Zjn_sc00043.1 maker exon 1605072 1605178 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:14
Zjn_sc00043.1 maker exon 1605665 1606759 . + . ID=Zjn_sc00043.1.g03320.1.sm.mkhc:exon:15

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