Z. japonica Nagirizaki
Zjn_sc00043.1.g00660.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G37810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 56 285 2e-34 93.4 29.4 44.9
Subject 283 41 271
Annot | Symbols: NIP4;1, NLM4 | NOD26-like intrinsic protein 4;1 | chr5:15045232-15047807 FORWARD LENGTH=283
NR ref|XP_004971599.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 9 301 e-110 98.3 71.3 77.9
Subject 298 6 297
Annot PREDICTED: aquaporin NIP4-1-like [Setaria italica]
IRGSP Os01t0112400-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 47 276 3e-93 94.4 56.8 65
Subject 286 47 277
Annot
Sbicolor Sobic.003G098100.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 303 17 302 e-101 95.4 65 75.9
Subject 289 3 288
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00043.1.g00660.1.sm.mk length: 303 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 3.1e-21 58-77
93-117
130-149
177-195
207-229
244-264
HMMPanther PTHR19139 AQUAPORIN 5.8e-71 36-268
HMMPfam PF00230 MIP 6.3e-29 60-259
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 3.9e-39 49-263
superfamily SSF81338 Aquaporin-like 2.8e-37 54-267
no_ID  
HMMPanther PTHR19139:SF22 NODULIN-26-RELATED 5.8e-71 36-268
Seg seg seg NA 7-28
200-218
279-294
Pseudomolecule
Chromosome Start End Strand
520018012002864+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00043.1 maker_non_over exon 367199 367519 . - . ID=Zjn_sc00043.1.g00660.1.sm.mk:exon:3
Zjn_sc00043.1 maker_non_over exon 367585 367998 . - . ID=Zjn_sc00043.1.g00660.1.sm.mk:exon:2
Zjn_sc00043.1 maker_non_over exon 368086 368262 . - . ID=Zjn_sc00043.1.g00660.1.sm.mk:exon:1

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