Z. japonica Nagirizaki
Zjn_sc00042.1.g00040.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G61440.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 4 361 e-145 101.9 72 81.7
Subject 368 6 368
Annot | Symbols: ATCYSC1, ARATH;BSAS3;1, CYSC1 | cysteine synthase C1 | chr3:22735885-22737792 FORWARD LENGTH=368
NR ref|XP_004975070.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 1 361 0.0 104.2 93.6 96.7
Subject 376 9 376
Annot PREDICTED: bifunctional L-3-cyanoalanine synthase/cysteine synthase 2, mitochondrial [Setaria italica]
IRGSP Os04t0165700-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 1 361 0.0 104.4 90.9 94.5
Subject 377 9 377
Annot
Sbicolor Sobic.006G016900.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 37 361 e-178 106.9 87.5 89.2
Subject 386 62 386
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00042.1.g00040.1.am.mkhc length: 361 aa.
IPR001216 Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site
method AccNumber shortName E-value location
Biological Process GO:0006535 cysteine biosynthetic process from serine    
PatternScan PS00901 CYS_SYNTHASE NA 72-90
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
HMMPfam PF00291 PALP 5.5e-62 47-333
superfamily SSF53686 Tryptophan 8.3e-99 40-359
IPR005856 Cysteine synthase K/M
Molecular Function GO:0004124 cysteine synthase activity    
Biological Process GO:0006535 cysteine biosynthetic process from serine    
HMMTigr TIGR01136 cysKM: 3.9e-124 47-345
IPR005859 Cysteine synthase A
Molecular Function GO:0004124 cysteine synthase activity    
Biological Process GO:0006535 cysteine biosynthetic process from serine    
HMMTigr TIGR01139 cysK: 1.1e-125 47-345
no_ID  
Gene3D G3DSA:3.40.50.1100 no description 2.2e-74 77-175
176-347
HMMPanther PTHR10314 SER/THR 7.7e-169 4-356
HMMPanther PTHR10314:SF8 CYSTEINE 7.7e-169 4-356
Seg seg seg NA 5-21
216-227
Pseudomolecule
Chromosome Start End Strand
1219629601967721-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00042.1 maker exon 42644 42682 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:11
Zjn_sc00042.1 maker exon 42703 43204 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:10
Zjn_sc00042.1 maker exon 43300 43380 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:9
Zjn_sc00042.1 maker exon 43754 43813 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:8
Zjn_sc00042.1 maker exon 43923 44002 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:7
Zjn_sc00042.1 maker exon 44087 44138 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:6
Zjn_sc00042.1 maker exon 44257 44394 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:5
Zjn_sc00042.1 maker exon 44546 44809 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:4
Zjn_sc00042.1 maker exon 45111 45168 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:3
Zjn_sc00042.1 maker exon 46873 46982 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:2
Zjn_sc00042.1 maker exon 47262 47405 . - . ID=Zjn_sc00042.1.g00040.1.am.mkhc:exon:1

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