Z. japonica Nagirizaki
Zjn_sc00041.1.g02170.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT2G01350.4 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
147 |
1 |
144 |
3e-55 |
222.4 |
70.7 |
81 |
| Subject |
327 |
1 |
154 |
|
| Annot |
| Symbols: QPT | quinolinate phoshoribosyltransferase | chr2:165332-167058 REVERSE LENGTH=327 |
| NR |
ref|NP_001063881.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
147 |
1 |
144 |
5e-67 |
252.4 |
86.4 |
91.8 |
| Subject |
371 |
52 |
198 |
|
| Annot |
Os09g0553600 [Oryza sativa Japonica Group] gi|122221886|sp|Q0IZS0.1|NADC_ORYSJ RecName: Full=Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; AltName: Full=Quinolinate phosphoribosyltransferase [decarboxylating]; Flags: Precursor gi|113632114|dbj|BAF25795.1| Os09g0553600 [Oryza sativa Japonica Group] gi|215687005|dbj|BAG90819.1| unnamed protein product [Oryza sativa Japonica Group] gi|222642059|gb|EEE70191.1| hypothetical protein OsJ_30273 [Oryza sativa Japonica Group] |
| IRGSP |
Os09t0553600-01_chr09_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
147 |
1 |
144 |
4e-70 |
252.4 |
86.4 |
91.8 |
| Subject |
371 |
52 |
198 |
|
| Annot |
|
| Sbicolor |
Sobic.002G291400.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
147 |
19 |
144 |
5e-67 |
255.1 |
83 |
85 |
| Subject |
375 |
71 |
202 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00041.1.g02170.1.sm.mkhc |
length: 147 aa. |
| IPR022412 |
Quinolinate phosphoribosyl transferase, N-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016763 |
transferase activity, transferring pentosyl groups |
|
|
| Gene3D |
G3DSA:3.90.1170.20 |
no description |
3.3e-37 |
15-144 |
| HMMPfam |
PF02749 |
QRPTase_N |
1.9e-23 |
31-118 |
| no_ID |
|
| HMMPanther |
PTHR32496 |
FAMILY |
1.5e-48 |
1-144 |
| HMMPanther |
PTHR32496:SF0 |
SUBFAMILY |
1.5e-48 |
1-144 |
| Seg |
seg |
seg |
NA |
2-16 |
| superfamily |
SSF54675 |
Nicotinate/Quinolinate |
6.8e-29 |
8-119 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 20 | 5048137 | 5052323 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00041.1 |
maker |
exon |
2012325 |
2012783 |
. |
- |
. |
ID=Zjn_sc00041.1.g02170.1.sm.mkhc:exon:7 |
| Zjn_sc00041.1 |
maker |
exon |
2012859 |
2012990 |
. |
- |
. |
ID=Zjn_sc00041.1.g02170.1.sm.mkhc:exon:6 |
| Zjn_sc00041.1 |
maker |
exon |
2014447 |
2014504 |
. |
- |
. |
ID=Zjn_sc00041.1.g02170.1.sm.mkhc:exon:5 |
| Zjn_sc00041.1 |
maker |
exon |
2014818 |
2014900 |
. |
- |
. |
ID=Zjn_sc00041.1.g02170.1.sm.mkhc:exon:4 |
| Zjn_sc00041.1 |
maker |
exon |
2015006 |
2015069 |
. |
- |
. |
ID=Zjn_sc00041.1.g02170.1.sm.mkhc:exon:3 |
| Zjn_sc00041.1 |
maker |
exon |
2015165 |
2015280 |
. |
- |
. |
ID=Zjn_sc00041.1.g02170.1.sm.mkhc:exon:2 |
| Zjn_sc00041.1 |
maker |
exon |
2016400 |
2016511 |
. |
- |
. |
ID=Zjn_sc00041.1.g02170.1.sm.mkhc:exon:1 |