Z. japonica Nagirizaki
Zjn_sc00041.1.g01930.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR ref|XP_004957598.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 2 335 4e-92 152.5 71.6 80.3
Subject 511 180 511
Annot PREDICTED: protein indeterminate-domain 5, chloroplastic-like [Setaria italica] gi|514733117|ref|XP_004957599.1| PREDICTED: protein indeterminate-domain 5, chloroplastic-like [Setaria italica] gi|514733121|ref|XP_004957600.1| PREDICTED: protein indeterminate-domain 5, chloroplastic-like [Setaria italica]
IRGSP Os09t0555700-03_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 2 334 1e-51 159.7 51.9 63.9
Subject 535 185 534
Annot
Sbicolor Sobic.002G293000.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 2 335 8e-92 159.1 67.5 77.3
Subject 533 180 533
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00041.1.g01930.1.sm.mk length: 335 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR10593 SERINE/THREONINE-PROTEIN 1.3e-17 4-261
HMMPanther PTHR10593:SF17 SUBFAMILY 1.3e-17 4-261
Seg seg seg NA 59-70
77-106
143-167
239-249
253-269
290-300
Pseudomolecule
Chromosome Start End Strand
2051945745196657-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00041.1 maker_non_over exon 1867991 1868007 . + . ID=Zjn_sc00041.1.g01930.1.sm.mk:exon:1
Zjn_sc00041.1 maker_non_over exon 1869084 1870074 . + . ID=Zjn_sc00041.1.g01930.1.sm.mk:exon:2

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