Z. japonica Nagirizaki
Zjn_sc00041.1.g01520.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G22130.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
182 |
3 |
154 |
5e-60 |
247.3 |
55.5 |
69.2 |
| Subject |
450 |
13 |
164 |
|
| Annot |
| Symbols: PNT1 | mannosyltransferase family protein | chr5:7337486-7339831 REVERSE LENGTH=450 |
| NR |
tpg|DAA39651.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
182 |
3 |
181 |
7e-90 |
100 |
88.5 |
94 |
| Subject |
182 |
4 |
182 |
|
| Annot |
TPA: hypothetical protein ZEAMMB73_130936 [Zea mays] |
| IRGSP |
Os03t0670200-01_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
182 |
1 |
154 |
2e-64 |
244 |
71.4 |
77.5 |
| Subject |
444 |
1 |
154 |
|
| Annot |
|
| Sbicolor |
Sobic.002G131400.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
182 |
2 |
154 |
4e-72 |
244 |
75.3 |
81.3 |
| Subject |
444 |
3 |
155 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00041.1.g01520.1.sm.mkhc |
length: 182 aa. |
| IPR007704 |
Mannosyltransferase, DXD |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005789 |
endoplasmic reticulum membrane |
|
|
| Biological Process |
GO:0006506 |
GPI anchor biosynthetic process |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0016758 |
transferase activity, transferring hexosyl groups |
|
|
| HMMPanther |
PTHR12886 |
PIG-M |
7.7e-76 |
1-154 |
| IPR009600 |
GPI transamidase subunit PIG-U |
| Cellular Component |
GO:0005789 |
endoplasmic reticulum membrane |
|
|
| Biological Process |
GO:0006506 |
GPI anchor biosynthetic process |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPfam |
PF06728 |
PIG-U |
5.9e-07 |
15-180 |
| no_ID |
|
| HMMPanther |
PTHR12886:SF0 |
SUBFAMILY |
7.7e-76 |
1-154 |
| Seg |
seg |
seg |
NA |
44-60 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 20 | 5541728 | 5544457 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00041.1 |
maker |
exon |
1520191 |
1520513 |
. |
+ |
. |
ID=Zjn_sc00041.1.g01520.1.sm.mkhc:exon:1 |
| Zjn_sc00041.1 |
maker |
exon |
1521022 |
1521206 |
. |
+ |
. |
ID=Zjn_sc00041.1.g01520.1.sm.mkhc:exon:2 |
| Zjn_sc00041.1 |
maker |
exon |
1522535 |
1522920 |
. |
+ |
. |
ID=Zjn_sc00041.1.g01520.1.sm.mkhc:exon:3 |