Z. japonica Nagirizaki
Zjn_sc00041.1.g01320.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G52940.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 341 11 341 e-128 108.2 68.6 79.5
Subject 369 7 369
Annot | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis ERG4/ERG24 family | chr3:19630369-19633112 REVERSE LENGTH=369
NR ref|NP_001147742.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 341 6 341 e-160 108.5 88.6 92.1
Subject 370 3 370
Annot delta(14)-sterol reductase [Zea mays] gi|194701770|gb|ACF84969.1| unknown [Zea mays] gi|195613410|gb|ACG28535.1| delta(14)-sterol reductase [Zea mays] gi|414590910|tpg|DAA41481.1| TPA: delta(14)-sterol reductase [Zea mays]
IRGSP Os09t0565600-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 341 7 341 e-157 108.2 85.3 90.9
Subject 369 3 369
Annot
Sbicolor Sobic.002G133000.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 341 17 341 e-159 108.5 86.8 90
Subject 370 14 370
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00041.1.g01320.1.sm.mkhc length: 341 aa.
IPR001171 Ergosterol biosynthesis ERG4/ERG24
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
HMMPfam PF01222 ERG4_ERG24 8.2e-16 10-287
292-341
IPR018083 Sterol reductase, conserved site
Molecular Function GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS01018 STEROL_REDUCT_2 NA 305-328
no_ID  
HMMPanther PTHR21257 STEROL 7.1e-225 14-341
HMMPanther PTHR21257:SF7 C-14 7.1e-225 14-341
Seg seg seg NA 3-16
20-36
61-72
Pseudomolecule
Chromosome Start End Strand
2056720545677107+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00041.1 maker exon 1387541 1388472 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:12
Zjn_sc00041.1 maker exon 1389298 1389429 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:11
Zjn_sc00041.1 maker exon 1389515 1389591 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:10
Zjn_sc00041.1 maker exon 1389789 1389870 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:9
Zjn_sc00041.1 maker exon 1389983 1390029 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:8
Zjn_sc00041.1 maker exon 1390106 1390226 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:7
Zjn_sc00041.1 maker exon 1390966 1391013 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:6
Zjn_sc00041.1 maker exon 1391206 1391264 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:5
Zjn_sc00041.1 maker exon 1391837 1391893 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:4
Zjn_sc00041.1 maker exon 1392110 1392180 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:3
Zjn_sc00041.1 maker exon 1392312 1392429 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:2
Zjn_sc00041.1 maker exon 1392535 1392594 . - . ID=Zjn_sc00041.1.g01320.1.sm.mkhc:exon:1

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