Z. japonica Nagirizaki
Zjn_sc00041.1.g00710.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G43410.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 128 1 114 1e-28 102.3 52.3 64.8
Subject 131 1 114
Annot | Symbols: | Integrase-type DNA-binding superfamily protein | chr5:17435010-17435405 REVERSE LENGTH=131
NR ref|XP_004956267.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 128 5 128 3e-39 103.1 79.7 85.9
Subject 132 3 132
Annot PREDICTED: ethylene-responsive transcription factor ERF096-like [Setaria italica]
IRGSP Os09t0571700-00_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 128 6 126 1e-41 102.3 65.6 74.2
Subject 131 11 131
Annot
Sbicolor Sobic.002G139300.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 128 1 123 9e-44 100.8 76.6 82.8
Subject 129 1 118
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00041.1.g00710.1.am.mk length: 128 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 1.2e-11 13-24
36-52
Gene3D G3DSA:3.30.730.10 no description 1.1e-30 12-71
HMMPfam PF00847 AP2 2.7e-17 11-63
HMMSmart SM00380 DNA-binding 6.9e-34 12-76
ProfileScan PS51032 AP2_ERF 23.841 12-70
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 9.6e-25 11-73
no_ID  
HMMPanther PTHR31190 FAMILY 2.8e-23 13-124
HMMPanther PTHR31190:SF0 SUBFAMILY 2.8e-23 13-124
Seg seg seg NA 80-102
Pseudomolecule
Chromosome Start End Strand
2061759786176364-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00041.1 maker_non_over exon 888284 888670 . + . ID=Zjn_sc00041.1.g00710.1.am.mk:exon:1

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