Z. japonica Nagirizaki
Zjn_sc00041.1.g00660.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G03760.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 535 194 513 e-146 99.6 42.6 53.1
Subject 533 110 428
Annot | Symbols: ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:985910-990087 REVERSE LENGTH=533
NR ref|XP_002459874.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 535 195 513 e-176 98.5 55.5 57.4
Subject 527 99 417
Annot hypothetical protein SORBIDRAFT_02g012870 [Sorghum bicolor] gi|241923251|gb|EER96395.1| hypothetical protein SORBIDRAFT_02g012870 [Sorghum bicolor]
IRGSP Os02t0192500-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 535 194 513 e-141 97.4 41.1 51.8
Subject 521 97 415
Annot
Sbicolor Sobic.002G139900.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 535 195 513 e-179 98.5 55.5 57.4
Subject 527 99 417
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00041.1.g00660.1.am.mk length: 535 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.90.550.10 no description 9.3e-20 214-392
HMMPanther PTHR32044 FAMILY 6.6e-228 14-513
HMMPanther PTHR32044:SF0 SUBFAMILY 6.6e-228 14-513
HMMPfam PF13641 Glyco_tranf_2_3 4.1e-33 199-416
Seg seg seg NA 2-25
63-73
84-93
142-149
superfamily SSF53448 Nucleotide-diphospho-sugar 2.6e-38 209-472
Pseudomolecule
Chromosome Start End Strand
2062198076224054+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00041.1 maker_non_over exon 840594 840662 . - . ID=Zjn_sc00041.1.g00660.1.am.mk:exon:4
Zjn_sc00041.1 maker_non_over exon 840939 841796 . - . ID=Zjn_sc00041.1.g00660.1.am.mk:exon:3
Zjn_sc00041.1 maker_non_over exon 841873 841971 . - . ID=Zjn_sc00041.1.g00660.1.am.mk:exon:2
Zjn_sc00041.1 maker_non_over exon 844260 844841 . - . ID=Zjn_sc00041.1.g00660.1.am.mk:exon:1

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