Z. japonica Nagirizaki
Zjn_sc00041.1.g00280.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G06290.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 694 259 683 e-161 97.3 40.1 48
Subject 675 6 473
Annot | Symbols: ACX3, ATACX3 | acyl-CoA oxidase 3 | chr1:1922423-1926002 FORWARD LENGTH=675
NR ref|XP_004965421.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 694 251 683 0.0 99 50.6 54.3
Subject 687 1 483
Annot PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like isoform X1 [Setaria italica]
IRGSP Os06t0354500-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 694 251 683 0.0 98.7 50.1 54.8
Subject 685 1 481
Annot
Sbicolor Sobic.003G354400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 694 251 683 0.0 98.6 50.7 53.9
Subject 684 1 480
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00041.1.g00280.1.am.mkhc length: 694 aa.
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
method AccNumber shortName E-value location
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:2.40.110.10 no description 5.2e-45 443-573
HMMPfam PF02770 Acyl-CoA_dh_M 2.2e-12 444-502
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF47203 Acyl-CoA 2.3e-21 583-679
IPR009100 Acyl-CoA dehydrogenase/oxidase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF56645 Acyl-CoA 1.5e-47 310-575
IPR012258 Acyl-CoA oxidase
Molecular Function GO:0003997 acyl-CoA oxidase activity    
Cellular Component GO:0005777 peroxisome    
Biological Process GO:0006631 fatty acid metabolic process    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR10909:SF11 ACYL-COA 1.3e-125 354-679
no_ID  
Gene3D G3DSA:1.20.140.10 no description 1.4e-05 594-647
648-683
HMMPanther PTHR10909 ELECTRON 1.3e-125 354-679
Seg seg seg NA 3-27
85-92
253-271
Pseudomolecule
Chromosome Start End Strand
2067182806725301+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00041.1 maker exon 339347 339863 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:12
Zjn_sc00041.1 maker exon 339900 340013 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:11
Zjn_sc00041.1 maker exon 340801 340894 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:10
Zjn_sc00041.1 maker exon 341645 341764 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:9
Zjn_sc00041.1 maker exon 342341 342415 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:8
Zjn_sc00041.1 maker exon 342498 342597 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:7
Zjn_sc00041.1 maker exon 342675 342847 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:6
Zjn_sc00041.1 maker exon 342921 343028 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:5
Zjn_sc00041.1 maker exon 343123 343240 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:4
Zjn_sc00041.1 maker exon 343728 344341 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:3
Zjn_sc00041.1 maker exon 344587 344731 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:2
Zjn_sc00041.1 maker exon 345881 346368 . - . ID=Zjn_sc00041.1.g00280.1.am.mkhc:exon:1

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