Z. japonica Nagirizaki
Zjn_sc00040.1.g05120.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G39770.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 123 446 e-170 80.9 63.9 68.4
Subject 361 38 361
Annot | Symbols: CYT1 | Glucose-1-phosphate adenylyltransferase family protein | chr2:16589401-16590741 FORWARD LENGTH=361
NR ref|NP_001142302.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 123 446 0.0 80.9 71.5 72.4
Subject 361 38 361
Annot uncharacterized protein LOC100274471 [Zea mays] gi|670427809|ref|XP_008654645.1| PREDICTED: uncharacterized protein LOC100274471 isoform X1 [Zea mays] gi|670427811|ref|XP_008654646.1| PREDICTED: uncharacterized protein LOC100274471 isoform X1 [Zea mays] gi|670427813|ref|XP_008654647.1| PREDICTED: uncharacterized protein LOC100274471 isoform X1 [Zea mays] gi|194693014|gb|ACF80591.1| unknown [Zea mays] gi|194708104|gb|ACF88136.1| unknown [Zea mays] gi|413951952|gb|AFW84601.1| hypothetical protein ZEAMMB73_169513 [Zea mays] gi|413951953|gb|AFW84602.1| hypothetical protein ZEAMMB73_169513 [Zea mays] gi|413951954|gb|AFW84603.1| hypothetical protein ZEAMMB73_169513 [Zea mays] gi|413951955|gb|AFW84604.1| hypothetical protein ZEAMMB73_169513 [Zea mays] gi|413951956|gb|AFW84605.1| hypothetical protein ZEAMMB73_169513 [Zea mays]
IRGSP Os08t0237200-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 123 446 e-180 80.9 67.9 70.9
Subject 361 38 361
Annot
Sbicolor Sobic.003G355200.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 123 446 0.0 80.9 70.6 71.7
Subject 361 38 361
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00040.1.g05120.1.am.mkhc length: 446 aa.
IPR001451 Bacterial transferase hexapeptide repeat
method AccNumber shortName E-value location
HMMPfam PF00132 Hexapep 3.8e-07 346-379
IPR005835 Nucleotidyl transferase
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016779 nucleotidyltransferase activity    
HMMPfam PF00483 NTP_transferase 4.3e-33 119-313
no_ID  
Gene3D G3DSA:2.160.10.10 no description 5.5e-19 329-435
Gene3D G3DSA:3.90.550.10 no description 7.4e-55 122-321
HMMPanther PTHR22572 SUGAR-1-PHOSPHATE 4.4e-146 122-446
HMMPanther PTHR22572:SF15 MANNOSE-1-PHOSPHATE 4.4e-146 122-446
Seg seg seg NA 51-62
superfamily SSF53448 Nucleotide-diphospho-sugar 5.2e-52 122-398
Pseudomolecule
Chromosome Start End Strand
61666680916669417+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00040.1 maker exon 2213191 2213507 . + . ID=Zjn_sc00040.1.g05120.1.am.mkhc:exon:1
Zjn_sc00040.1 maker exon 2213745 2213793 . + . ID=Zjn_sc00040.1.g05120.1.am.mkhc:exon:2
Zjn_sc00040.1 maker exon 2214441 2214503 . + . ID=Zjn_sc00040.1.g05120.1.am.mkhc:exon:3
Zjn_sc00040.1 maker exon 2214597 2214836 . + . ID=Zjn_sc00040.1.g05120.1.am.mkhc:exon:4
Zjn_sc00040.1 maker exon 2214908 2215799 . + . ID=Zjn_sc00040.1.g05120.1.am.mkhc:exon:5

Top