Z. japonica Nagirizaki
Zjn_sc00040.1.g02860.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G12200.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 543 36 543 0.0 97.8 71.5 82.7
Subject 531 26 530
Annot | Symbols: PYD2 | pyrimidine 2 | chr5:3941700-3944727 REVERSE LENGTH=531
NR ref|XP_002456505.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 543 58 543 0.0 98.7 84.7 87.7
Subject 536 51 536
Annot hypothetical protein SORBIDRAFT_03g037550 [Sorghum bicolor] gi|241928480|gb|EES01625.1| hypothetical protein SORBIDRAFT_03g037550 [Sorghum bicolor]
IRGSP Os01t0807900-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 543 58 543 0.0 99.3 82.1 86.9
Subject 539 54 539
Annot
Sbicolor Sobic.003G329400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 543 58 543 0.0 98.7 84.7 87.7
Subject 536 51 536
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00040.1.g02860.1.sm.mkhc length: 543 aa.
IPR011059 Metal-dependent hydrolase, composite domain
method AccNumber shortName E-value location
Molecular Function GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds    
superfamily SSF51338 Composite 2.2e-35 58-516
IPR011778 Hydantoinase/dihydropyrimidinase
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006208 pyrimidine nucleobase catabolic process    
Molecular Function GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides    
HMMTigr TIGR02033 D-hydantoinase: 2.5e-205 59-510
no_ID  
Gene3D G3DSA:2.30.40.10 no description 2.6e-12 58-125
433-519
Gene3D G3DSA:3.20.20.140 no description 1.4e-113 126-432
HMMPanther PTHR11647 AMINOHYDROLASE 6.8e-284 46-535
HMMPanther PTHR11647:SF1 DIHYDROPYRIMIDINASE 6.8e-284 46-535
HMMPfam PF13147 Amidohydro_4 4.4e-17 102-450
Seg seg seg NA 7-17
40-57
320-331
superfamily SSF51556 Metallo-dependent 2.8e-99 111-440
Pseudomolecule
Chromosome Start End Strand
61570540815714539+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00040.1 maker exon 1251790 1251900 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:1
Zjn_sc00040.1 maker exon 1251957 1252121 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:2
Zjn_sc00040.1 maker exon 1252254 1252308 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:3
Zjn_sc00040.1 maker exon 1252390 1252659 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:4
Zjn_sc00040.1 maker exon 1252835 1253046 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:5
Zjn_sc00040.1 maker exon 1253198 1253318 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:6
Zjn_sc00040.1 maker exon 1253473 1253560 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:7
Zjn_sc00040.1 maker exon 1253634 1253712 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:8
Zjn_sc00040.1 maker exon 1253897 1253984 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:9
Zjn_sc00040.1 maker exon 1254096 1254136 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:10
Zjn_sc00040.1 maker exon 1254312 1254364 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:11
Zjn_sc00040.1 maker exon 1254487 1254643 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:12
Zjn_sc00040.1 maker exon 1254733 1260921 . + . ID=Zjn_sc00040.1.g02860.1.sm.mkhc:exon:13

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