Z. japonica Nagirizaki
Zjn_sc00040.1.g02550.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G12780.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 433 99 432 e-142 111.1 62.8 69.5
Subject 481 54 476
Annot | Symbols: PGK1 | phosphoglycerate kinase 1 | chr3:4061127-4063140 REVERSE LENGTH=481
NR ref|XP_004970259.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 433 55 432 e-160 111.8 74.1 78.5
Subject 484 12 484
Annot PREDICTED: phosphoglycerate kinase, chloroplastic-like isoform X2 [Setaria italica]
IRGSP Os05t0496200-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 433 74 432 e-161 111.8 70.4 76
Subject 484 30 479
Annot
Sbicolor Sobic.009G183700.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 433 49 432 e-158 111.5 72.3 78.5
Subject 483 5 478
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00040.1.g02550.1.am.mk length: 433 aa.
IPR001576 Phosphoglycerate kinase
method AccNumber shortName E-value location
Molecular Function GO:0004618 phosphoglycerate kinase activity    
Biological Process GO:0006096 glycolysis    
FPrintScan PR00477 PHGLYCKINASE 1.1e-19 137-153
159-181
320-339
HMMPanther PTHR11406 PHOSPHOGLYCERATE 2.9e-160 86-433
HMMPfam PF00162 PGK 6.5e-16 134-204
206-368
366-421
superfamily SSF53748 Phosphoglycerate 7.4e-113 129-431
IPR015824 Phosphoglycerate kinase, N-terminal
Molecular Function GO:0004618 phosphoglycerate kinase activity    
Biological Process GO:0006096 glycolysis    
Gene3D G3DSA:3.40.50.1260 no description 2.4e-26 126-205
206-266
IPR015901 Phosphoglycerate kinase, C-terminal
Molecular Function GO:0004618 phosphoglycerate kinase activity    
Biological Process GO:0006096 glycolysis    
Gene3D G3DSA:3.40.50.1270 no description 5.9e-15 267-366
367-419
IPR015911 Phosphoglycerate kinase, conserved site
Molecular Function GO:0004618 phosphoglycerate kinase activity    
Biological Process GO:0006096 glycolysis    
PatternScan PS00111 PGLYCERATE_KINASE NA 142-152
no_ID  
HMMPanther PTHR11406:SF0 PHOSPHOGLYCERATE 2.9e-160 86-433
Seg seg seg NA 47-63
103-123
331-345
Pseudomolecule
Chromosome Start End Strand
61555308115555412+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00040.1 maker_non_over exon 1099463 1099523 . + . ID=Zjn_sc00040.1.g02550.1.am.mk:exon:1
Zjn_sc00040.1 maker_non_over exon 1099758 1100260 . + . ID=Zjn_sc00040.1.g02550.1.am.mk:exon:2
Zjn_sc00040.1 maker_non_over exon 1100362 1100414 . + . ID=Zjn_sc00040.1.g02550.1.am.mk:exon:3
Zjn_sc00040.1 maker_non_over exon 1100619 1100787 . + . ID=Zjn_sc00040.1.g02550.1.am.mk:exon:4
Zjn_sc00040.1 maker_non_over exon 1100937 1101254 . + . ID=Zjn_sc00040.1.g02550.1.am.mk:exon:5
Zjn_sc00040.1 maker_non_over exon 1101597 1101794 . + . ID=Zjn_sc00040.1.g02550.1.am.mk:exon:6

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