Z. japonica Nagirizaki
Zjn_sc00040.1.g01770.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G60880.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 349 7 349 e-147 104.6 71.3 82.5
Subject 365 18 365
Annot | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synthase 1 | chr3:22495086-22496542 FORWARD LENGTH=365
NR ref|XP_004976558.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 349 26 349 e-169 108 82.8 87.4
Subject 377 49 377
Annot PREDICTED: 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic-like [Setaria italica]
IRGSP Os04t0574800-00_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 349 41 349 e-170 100.3 79.7 84.5
Subject 350 42 350
Annot
Sbicolor Sobic.010G216300.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 349 26 349 e-170 109.7 81.7 86.8
Subject 383 55 383
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00040.1.g01770.1.sm.mk length: 349 aa.
IPR002220 DapA-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
FPrintScan PR00146 DHPICSNTHASE 5.3e-38 82-103
118-136
150-166
173-190
HMMPanther PTHR12128 DIHYDRODIPICOLINATE 6.1e-99 36-335
HMMPfam PF00701 DHDPS 7.5e-105 50-325
IPR005263 Dihydrodipicolinate synthase (4-hydroxy-tetrahydrodipicolinate synthase), DapA
Molecular Function GO:0008840 4-hydroxy-tetrahydrodipicolinate synthase    
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate    
HMMTigr TIGR00674 dapA: 6.4e-63 52-317
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 6.6e-67 51-325
IPR020624 Dihydrodipicolinate synthetase, conserved site
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
PatternScan PS00665 DHDPS_1 NA 85-102
IPR020625 Dihydrodipicolinate synthetase, active site
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
PatternScan PS00666 DHDPS_2 NA 178-208
no_ID  
HMMPanther PTHR12128:SF10 SUBFAMILY 6.1e-99 36-335
Seg seg seg NA 79-95
superfamily SSF51569 Aldolase 1.5e-62 46-326
Pseudomolecule
Chromosome Start End Strand
61525263915254487-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00040.1 maker_non_over exon 799021 799948 . - . ID=Zjn_sc00040.1.g01770.1.sm.mk:exon:2
Zjn_sc00040.1 maker_non_over exon 800748 800869 . - . ID=Zjn_sc00040.1.g01770.1.sm.mk:exon:1

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