Z. japonica Nagirizaki
Zjn_sc00040.1.g00320.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G62430.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 540 2 369 e-170 78 50.9 59.4
Subject 421 3 368
Annot | Symbols: ATCDS1, CDS1 | CDP-diacylglycerol synthase 1 | chr1:23106274-23108923 REVERSE LENGTH=421
NR ref|XP_004970020.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 540 1 369 0.0 78.7 62.8 65.2
Subject 425 1 369
Annot PREDICTED: phosphatidate cytidylyltransferase 1-like [Setaria italica] gi|514782152|ref|XP_004970021.1| PREDICTED: phosphatidate cytidylyltransferase 1-like [Setaria italica] gi|514782156|ref|XP_004970022.1| PREDICTED: phosphatidate cytidylyltransferase 1-like [Setaria italica]
IRGSP Os01t0758400-02_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 540 1 369 0.0 79.6 61.7 65
Subject 430 6 374
Annot
Sbicolor Sobic.003G301900.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 540 1 369 0.0 98.1 62 64.8
Subject 530 106 474
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00040.1.g00320.1.am.mkhc length: 540 aa.
IPR000374 Phosphatidate cytidylyltransferase
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
HMMPfam PF01148 CTP_transf_1 3.9e-83 52-369
PatternScan PS01315 CDS NA 340-366
no_ID  
HMMPanther PTHR13773 PHOSPHATIDATE 1e-163 9-369
HMMPanther PTHR13773:SF0 SUBFAMILY 1e-163 9-369
Seg seg seg NA 166-181
390-397
Pseudomolecule
Chromosome Start End Strand
61460982114616442-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00040.1 maker exon 156203 156651 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:11
Zjn_sc00040.1 maker exon 157419 157488 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:10
Zjn_sc00040.1 maker exon 159287 159343 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:9
Zjn_sc00040.1 maker exon 159431 159559 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:8
Zjn_sc00040.1 maker exon 160161 160247 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:7
Zjn_sc00040.1 maker exon 160336 160383 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:6
Zjn_sc00040.1 maker exon 160547 160703 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:5
Zjn_sc00040.1 maker exon 161227 161368 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:4
Zjn_sc00040.1 maker exon 161854 162005 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:3
Zjn_sc00040.1 maker exon 162171 162424 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:2
Zjn_sc00040.1 maker exon 162739 162824 . - . ID=Zjn_sc00040.1.g00320.1.am.mkhc:exon:1

Top