Z. japonica Nagirizaki
Zjn_sc00039.1.g05590.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR ref|XP_004959375.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 466 13 459 e-142 107.7 59.7 72.1
Subject 502 48 489
Annot PREDICTED: uncharacterized protein LOC101784934 [Setaria italica]
IRGSP Os09t0324300-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 466 28 457 3e-84 100.4 44 55.2
Subject 468 45 459
Annot
Sbicolor Sobic.005G125200.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 466 82 449 2e-50 86.3 32.4 45.3
Subject 402 12 385
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00039.1.g05590.1.sm.mk length: 466 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00256 A 0.0004 33-74
ProfileScan PS50181 FBOX 9.577 27-77
superfamily SSF81383 F-box 8.8e-11 20-87
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 8.9e-07 26-67
HMMPfam PF12937 F-box-like 7.9e-08 31-73
Seg seg seg NA 5-21
165-179
Pseudomolecule
Chromosome Start End Strand
191269502312696423-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00039.1 maker_non_over exon 2499708 2501108 . + . ID=Zjn_sc00039.1.g05590.1.sm.mk:exon:1

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