Z. japonica Nagirizaki
Zjn_sc00039.1.g04850.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G39770.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 379 37 372 e-126 92.1 57.8 69.1
Subject 349 19 349
Annot | Symbols: TPPH | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:18449138-18451218 REVERSE LENGTH=349
NR ref|XP_002460140.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 379 1 377 e-177 100.5 87.3 90.8
Subject 381 1 381
Annot hypothetical protein SORBIDRAFT_02g023260 [Sorghum bicolor] gi|241923517|gb|EER96661.1| hypothetical protein SORBIDRAFT_02g023260 [Sorghum bicolor]
IRGSP Os09t0369400-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 379 1 376 e-159 98.9 79.7 85.5
Subject 375 1 375
Annot
Sbicolor Sobic.002G184600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 379 1 377 e-180 100.5 87.3 90.8
Subject 381 1 381
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00039.1.g04850.1.sm.mkhc length: 379 aa.
IPR003337 Trehalose-phosphatase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005992 trehalose biosynthetic process    
HMMPfam PF02358 Trehalose_PPase 5.1e-74 118-353
HMMTigr TIGR00685 T6PP: 2.2e-47 113-364
IPR006379 HAD-superfamily hydrolase, subfamily IIB
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMTigr TIGR01484 HAD-SF-IIB: 2.5e-18 117-329
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 1.1e-54 277-366
superfamily SSF56784 HAD-like 2e-45 115-364
no_ID  
HMMPanther PTHR10788 TREHALOSE-6-PHOSPHATE 7.2e-147 66-367
Seg seg seg NA 4-28
54-65
Pseudomolecule
Chromosome Start End Strand
191304839813053336+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00039.1 maker exon 2142795 2145325 . - . ID=Zjn_sc00039.1.g04850.1.sm.mkhc:exon:9
Zjn_sc00039.1 maker exon 2145678 2145770 . - . ID=Zjn_sc00039.1.g04850.1.sm.mkhc:exon:8
Zjn_sc00039.1 maker exon 2145933 2146003 . - . ID=Zjn_sc00039.1.g04850.1.sm.mkhc:exon:7
Zjn_sc00039.1 maker exon 2146125 2146272 . - . ID=Zjn_sc00039.1.g04850.1.sm.mkhc:exon:6
Zjn_sc00039.1 maker exon 2146451 2146552 . - . ID=Zjn_sc00039.1.g04850.1.sm.mkhc:exon:5
Zjn_sc00039.1 maker exon 2146709 2146762 . - . ID=Zjn_sc00039.1.g04850.1.sm.mkhc:exon:4
Zjn_sc00039.1 maker exon 2146861 2146965 . - . ID=Zjn_sc00039.1.g04850.1.sm.mkhc:exon:3
Zjn_sc00039.1 maker exon 2147087 2147158 . - . ID=Zjn_sc00039.1.g04850.1.sm.mkhc:exon:2
Zjn_sc00039.1 maker exon 2147245 2147733 . - . ID=Zjn_sc00039.1.g04850.1.sm.mkhc:exon:1

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