Z. japonica Nagirizaki
Zjn_sc00039.1.g02630.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G31590.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 650 1 650 0.0 106.5 70.3 82.3
Subject 692 1 692
Annot | Symbols: ATCSLC05, CSLC05, ATCSLC5, CSLC5 | Cellulose-synthase-like C5 | chr4:15309889-15312336 REVERSE LENGTH=692
NR ref|XP_004956875.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 650 1 650 0.0 107.7 87.1 91.8
Subject 700 1 700
Annot PREDICTED: probable xyloglucan glycosyltransferase 2 [Setaria italica]
IRGSP Os09t0428000-00_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 650 210 649 0.0 74.6 59.4 62.9
Subject 485 1 484
Annot
Sbicolor Sobic.002G208200.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 650 1 650 0.0 107.7 87.8 92.5
Subject 700 1 700
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00039.1.g02630.1.sm.mk length: 650 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.90.550.10 no description 4.3e-21 229-463
HMMPanther PTHR32044 FAMILY 0 68-650
HMMPanther PTHR32044:SF0 SUBFAMILY 0 68-650
HMMPfam PF13641 Glyco_tranf_2_3 2.3e-35 229-461
Seg seg seg NA 76-90
119-125
607-622
superfamily SSF53448 Nucleotide-diphospho-sugar 5.5e-48 224-473
Pseudomolecule
Chromosome Start End Strand
191408873314091252-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00039.1 maker_non_over exon 1104879 1105604 . + . ID=Zjn_sc00039.1.g02630.1.sm.mk:exon:1
Zjn_sc00039.1 maker_non_over exon 1105691 1105999 . + . ID=Zjn_sc00039.1.g02630.1.sm.mk:exon:2
Zjn_sc00039.1 maker_non_over exon 1106117 1106407 . + . ID=Zjn_sc00039.1.g02630.1.sm.mk:exon:3
Zjn_sc00039.1 maker_non_over exon 1106498 1106611 . + . ID=Zjn_sc00039.1.g02630.1.sm.mk:exon:4
Zjn_sc00039.1 maker_non_over exon 1106703 1106730 . + . ID=Zjn_sc00039.1.g02630.1.sm.mk:exon:5
Zjn_sc00039.1 maker_non_over exon 1106914 1107398 . + . ID=Zjn_sc00039.1.g02630.1.sm.mk:exon:6

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