Z. japonica Nagirizaki
Zjn_sc00039.1.g02110.1.sm.mkhc ( /TE )
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G19180.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 315 27 238 3e-22 80.3 27.3 37.5
Subject 253 19 252
Annot | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain protein 1 | chr1:6622312-6623271 FORWARD LENGTH=253
NR ref|XP_004956892.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 315 1 241 1e-56 70.8 47.3 53.7
Subject 223 1 219
Annot PREDICTED: protein TIFY 10A [Setaria italica]
IRGSP Os09t0439200-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 315 26 241 3e-53 73.7 40 48.3
Subject 232 14 228
Annot
Sbicolor Sobic.002G214800.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 315 15 241 1e-58 70.2 43.2 50.5
Subject 221 1 216
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00039.1.g02110.1.sm.mkhc length: 315 aa.
IPR010399 Tify
method AccNumber shortName E-value location
HMMPfam PF06200 tify 4.2e-08 129-160
ProfileScan PS51320 TIFY 12.480 127-162
IPR018467 CO/COL/TOC1, conserved site
HMMPfam PF09425 CCT_2 4.1e-13 190-216
no_ID  
Seg seg seg NA 2-27
77-90
283-300
Pseudomolecule
Chromosome Start End Strand
191429870014301113-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00039.1 maker exon 895018 895317 . + . ID=Zjn_sc00039.1.g02110.1.sm.mkhc:exon:1
Zjn_sc00039.1 maker exon 895532 895718 . + . ID=Zjn_sc00039.1.g02110.1.sm.mkhc:exon:2
Zjn_sc00039.1 maker exon 895864 896054 . + . ID=Zjn_sc00039.1.g02110.1.sm.mkhc:exon:3
Zjn_sc00039.1 maker exon 896144 896201 . + . ID=Zjn_sc00039.1.g02110.1.sm.mkhc:exon:4
Zjn_sc00039.1 maker exon 896317 896410 . + . ID=Zjn_sc00039.1.g02110.1.sm.mkhc:exon:5
Zjn_sc00039.1 maker exon 897198 897431 . + . ID=Zjn_sc00039.1.g02110.1.sm.mkhc:exon:6

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