Z. japonica Nagirizaki
Zjn_sc00039.1.g01710.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G50480.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 563 3 433 0.0 112.6 65.4 71.2
Subject 634 2 432
Annot | Symbols: THFS | 10-formyltetrahydrofolate synthetase | chr1:18702064-18704687 FORWARD LENGTH=634
NR ref|NP_001292743.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 563 1 433 0.0 130.2 72.5 74.8
Subject 733 99 531
Annot formate--tetrahydrofolate ligase [Zea mays]
IRGSP Os09t0446800-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 563 2 433 0.0 125.6 72.8 74.6
Subject 707 74 505
Annot
Sbicolor Sobic.002G220200.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 563 1 433 0.0 133.4 72.3 74.6
Subject 751 117 549
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00039.1.g01710.1.sm.mkhc length: 563 aa.
IPR000559 Formate-tetrahydrofolate ligase, FTHFS
method AccNumber shortName E-value location
Molecular Function GO:0004329 formate-tetrahydrofolate ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0009396 folic acid-containing compound biosynthetic process    
HMMPfam PF01268 FTHFS 7.8e-48 16-411
424-563
IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site
Molecular Function GO:0004329 formate-tetrahydrofolate ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0009396 folic acid-containing compound biosynthetic process    
PatternScan PS00721 FTHFS_1 NA 118-128
PatternScan PS00722 FTHFS_2 NA 398-409
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.9e-203 18-561
no_ID  
Gene3D G3DSA:3.10.410.10 no description 4.9e-37 450-538
Gene3D G3DSA:3.30.1510.10 no description 1.3e-53 219-314
Gene3D G3DSA:3.40.50.300 no description 6.3e-105 315-428
HMMPanther PTHR24508 FAMILY 0 1-563
HMMPanther PTHR24508:SF5 SUBFAMILY 0 1-563
Seg seg seg NA 121-127
147-161
Pseudomolecule
Chromosome Start End Strand
191444039914444325+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00039.1 maker exon 751806 752463 . - . ID=Zjn_sc00039.1.g01710.1.sm.mkhc:exon:5
Zjn_sc00039.1 maker exon 752768 752914 . - . ID=Zjn_sc00039.1.g01710.1.sm.mkhc:exon:4
Zjn_sc00039.1 maker exon 753674 754633 . - . ID=Zjn_sc00039.1.g01710.1.sm.mkhc:exon:3
Zjn_sc00039.1 maker exon 755330 755479 . - . ID=Zjn_sc00039.1.g01710.1.sm.mkhc:exon:2
Zjn_sc00039.1 maker exon 755574 755732 . - . ID=Zjn_sc00039.1.g01710.1.sm.mkhc:exon:1

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