Z. japonica Nagirizaki
Zjn_sc00039.1.g01520.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G05010.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
328 |
8 |
326 |
e-122 |
98.5 |
64.9 |
78.7 |
| Subject |
323 |
1 |
318 |
|
| Annot |
| Symbols: EFE, ACO4, EAT1 | ethylene-forming enzyme | chr1:1431419-1432695 REVERSE LENGTH=323 |
| NR |
gb|ABM74187.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
328 |
4 |
328 |
e-164 |
98.2 |
87.8 |
91.8 |
| Subject |
322 |
1 |
322 |
|
| Annot |
1-aminocyclopropane-1-carboxylate oxidase [Saccharum arundinaceum] |
| IRGSP |
Os09t0451400-01_chr09_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
328 |
4 |
328 |
e-165 |
98.2 |
84.8 |
91.2 |
| Subject |
322 |
1 |
322 |
|
| Annot |
|
| Sbicolor |
Sobic.002G221900.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
328 |
4 |
328 |
e-154 |
100.3 |
82 |
89.3 |
| Subject |
329 |
1 |
329 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00039.1.g01520.1.am.mkhc |
length: 328 aa. |
| IPR005123 |
Oxoglutarate/iron-dependent dioxygenase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Molecular Function |
GO:0016706 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF03171 |
2OG-FeII_Oxy |
1.4e-24 |
169-265 |
| ProfileScan |
PS51471 |
FE2OG_OXY |
14.073 |
165-265 |
| IPR026992 |
Non-haem dioxygenase N-terminal domain |
| HMMPfam |
PF14226 |
DIOX_N |
1.9e-17 |
12-109 |
| IPR027443 |
Isopenicillin N synthase-like |
| Gene3D |
G3DSA:2.60.120.330 |
no description |
1e-88 |
10-312 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
125-146 |
| HMMPanther |
PTHR10209 |
OXIDOREDUCTASE, |
1.6e-115 |
10-321 |
| HMMPanther |
PTHR10209:SF55 |
OXIDOREDUCTASE, |
1.6e-115 |
10-321 |
| Seg |
seg |
seg |
NA |
129-149 |
| superfamily |
SSF51197 |
Clavaminate |
8e-100 |
9-318 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 19 | 14521426 | 14522669 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00039.1 |
maker |
exon |
673462 |
673701 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01520.1.am.mkhc:exon:1 |
| Zjn_sc00039.1 |
maker |
exon |
673845 |
674705 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01520.1.am.mkhc:exon:2 |