Z. japonica Nagirizaki
Zjn_sc00039.1.g01310.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT1G08080.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
289 |
43 |
271 |
4e-54 |
95.2 |
37 |
49.5 |
| Subject |
275 |
40 |
269 |
|
| Annot |
| Symbols: ATACA7, ACA7 | alpha carbonic anhydrase 7 | chr1:2517022-2518546 REVERSE LENGTH=275 |
| NR |
ref|XP_004959504.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
289 |
1 |
272 |
e-102 |
100.3 |
65.4 |
77.2 |
| Subject |
290 |
1 |
270 |
|
| Annot |
PREDICTED: alpha carbonic anhydrase 2-like [Setaria italica] |
| IRGSP |
Os08t0470200-02_chr08_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
289 |
32 |
268 |
3e-59 |
95.2 |
39.1 |
53.6 |
| Subject |
275 |
24 |
262 |
|
| Annot |
|
| Sbicolor |
Sobic.002G224000.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
289 |
1 |
272 |
3e-99 |
101 |
62.3 |
73.7 |
| Subject |
292 |
1 |
268 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00039.1.g01310.1.sm.mk |
length: 289 aa. |
| IPR001148 |
Alpha carbonic anhydrase |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.10.200.10 |
no description |
3.4e-59 |
42-268 |
| HMMPfam |
PF00194 |
Carb_anhydrase |
1.6e-28 |
59-254 |
| HMMSmart |
SM01057 |
Eukaryotic-type |
9.8e-63 |
43-271 |
| ProfileScan |
PS51144 |
ALPHA_CA_2 |
41.433 |
41-274 |
| superfamily |
SSF51069 |
Carbonic |
5.4e-61 |
41-272 |
| IPR018338 |
Carbonic anhydrase, alpha-class, conserved site |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Biological Process |
GO:0006730 |
one-carbon metabolic process |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| PatternScan |
PS00162 |
ALPHA_CA_1 |
NA |
135-151 |
| IPR023561 |
Carbonic anhydrase, alpha-class |
| HMMPanther |
PTHR18952 |
CARBONIC |
9.2e-81 |
3-269 |
| no_ID |
|
| HMMPanther |
PTHR18952:SF2 |
CARBONIC |
9.2e-81 |
3-269 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 19 | 14600140 | 14602605 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00039.1 |
maker_non_over |
exon |
593526 |
593634 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01310.1.sm.mk:exon:1 |
| Zjn_sc00039.1 |
maker_non_over |
exon |
593804 |
594015 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01310.1.sm.mk:exon:2 |
| Zjn_sc00039.1 |
maker_non_over |
exon |
594090 |
594196 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01310.1.sm.mk:exon:3 |
| Zjn_sc00039.1 |
maker_non_over |
exon |
594350 |
594458 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01310.1.sm.mk:exon:4 |
| Zjn_sc00039.1 |
maker_non_over |
exon |
594658 |
594828 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01310.1.sm.mk:exon:5 |
| Zjn_sc00039.1 |
maker_non_over |
exon |
595098 |
595148 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01310.1.sm.mk:exon:6 |
| Zjn_sc00039.1 |
maker_non_over |
exon |
595234 |
595281 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01310.1.sm.mk:exon:7 |
| Zjn_sc00039.1 |
maker_non_over |
exon |
595515 |
595531 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01310.1.sm.mk:exon:8 |
| Zjn_sc00039.1 |
maker_non_over |
exon |
595946 |
595991 |
. |
+ |
. |
ID=Zjn_sc00039.1.g01310.1.sm.mk:exon:9 |