Z. japonica Nagirizaki
Zjn_sc00039.1.g00860.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G33580.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
286 |
87 |
286 |
1e-73 |
105.2 |
43.7 |
58.4 |
| Subject |
301 |
80 |
301 |
|
| Annot |
| Symbols: ATBCA5, BCA5 | beta carbonic anhydrase 5 | chr4:16139406-16141363 FORWARD LENGTH=301 |
| NR |
ref|XP_004957059.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
286 |
5 |
286 |
e-131 |
107.7 |
80.8 |
89.5 |
| Subject |
308 |
6 |
308 |
|
| Annot |
PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Setaria italica] |
| IRGSP |
Os09t0464000-02_chr09_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
286 |
1 |
286 |
e-130 |
107 |
77.6 |
88.8 |
| Subject |
306 |
1 |
306 |
|
| Annot |
|
| Sbicolor |
Sobic.002G230100.4.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
286 |
1 |
286 |
e-130 |
107 |
78.7 |
90.2 |
| Subject |
306 |
1 |
306 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00039.1.g00860.1.sm.mkhc |
length: 286 aa. |
| IPR001765 |
Carbonic anhydrase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Gene3D |
G3DSA:3.40.1050.10 |
no description |
4.5e-52 |
86-264 |
| HMMPanther |
PTHR11002 |
FAMILY |
1.2e-54 |
18-271 |
| HMMPfam |
PF00484 |
Pro_CA |
3.9e-31 |
123-255 |
| HMMSmart |
SM00947 |
Carbonic |
2.7e-35 |
115-264 |
| superfamily |
SSF53056 |
beta-carbonic |
1.7e-51 |
54-274 |
| IPR015892 |
Carbonic anhydrase, prokaryotic-like, conserved site |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Biological Process |
GO:0015976 |
carbon utilization |
|
|
| PatternScan |
PS00704 |
PROK_CO2_ANHYDRASE_1 |
NA |
127-134 |
| no_ID |
|
| HMMPanther |
PTHR11002:SF1 |
SUBFAMILY |
1.2e-54 |
18-271 |
| Seg |
seg |
seg |
NA |
2-18 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 19 | 14851747 | 14855419 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00039.1 |
maker |
exon |
340712 |
340810 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00860.1.sm.mkhc:exon:1 |
| Zjn_sc00039.1 |
maker |
exon |
340908 |
340960 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00860.1.sm.mkhc:exon:2 |
| Zjn_sc00039.1 |
maker |
exon |
341931 |
342092 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00860.1.sm.mkhc:exon:3 |
| Zjn_sc00039.1 |
maker |
exon |
342188 |
342236 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00860.1.sm.mkhc:exon:4 |
| Zjn_sc00039.1 |
maker |
exon |
342316 |
342429 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00860.1.sm.mkhc:exon:5 |
| Zjn_sc00039.1 |
maker |
exon |
342704 |
342786 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00860.1.sm.mkhc:exon:6 |
| Zjn_sc00039.1 |
maker |
exon |
342875 |
342977 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00860.1.sm.mkhc:exon:7 |
| Zjn_sc00039.1 |
maker |
exon |
343354 |
344384 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00860.1.sm.mkhc:exon:8 |