Z. japonica Nagirizaki
Zjn_sc00039.1.g00520.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G09020.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
198 |
30 |
197 |
1e-39 |
385.9 |
53.5 |
64.1 |
| Subject |
764 |
499 |
764 |
|
| Annot |
| Symbols: ATISA3, ISA3 | isoamylase 3 | chr4:5784099-5788839 FORWARD LENGTH=764 |
| NR |
gb|EEE69882.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
198 |
30 |
198 |
4e-64 |
394.9 |
72.7 |
77.3 |
| Subject |
782 |
516 |
782 |
|
| Annot |
hypothetical protein OsJ_29702 [Oryza sativa Japonica Group] |
| IRGSP |
Os09t0469400-02_chr09_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
198 |
100 |
198 |
4e-47 |
64.6 |
41.9 |
46.5 |
| Subject |
128 |
30 |
128 |
|
| Annot |
|
| Sbicolor |
Sobic.002G233600.2.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
198 |
30 |
198 |
3e-52 |
391.9 |
64.1 |
71.2 |
| Subject |
776 |
510 |
776 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00039.1.g00520.1.am.mkhc |
length: 198 aa. |
| IPR013780 |
Glycosyl hydrolase, family 13, all-beta |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.60.40.1180 |
no description |
1.7e-19 |
104-196 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
2.9e-05 |
49-103 |
| IPR015902 |
Glycoside hydrolase, family 13 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| HMMPanther |
PTHR10357 |
ALPHA-AMYLASE |
4.6e-39 |
30-194 |
| no_ID |
|
| HMMPanther |
PTHR10357:SF75 |
ISOAMYLASE, |
4.6e-39 |
30-194 |
| superfamily |
SSF51011 |
Glycosyl |
2e-24 |
101-197 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 19 | 14969115 | 14975964 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00039.1 |
maker |
exon |
220167 |
220259 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00520.1.am.mkhc:exon:1 |
| Zjn_sc00039.1 |
maker |
exon |
223687 |
223749 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00520.1.am.mkhc:exon:2 |
| Zjn_sc00039.1 |
maker |
exon |
224231 |
224303 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00520.1.am.mkhc:exon:3 |
| Zjn_sc00039.1 |
maker |
exon |
224745 |
224824 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00520.1.am.mkhc:exon:4 |
| Zjn_sc00039.1 |
maker |
exon |
225292 |
225353 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00520.1.am.mkhc:exon:5 |
| Zjn_sc00039.1 |
maker |
exon |
225469 |
225580 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00520.1.am.mkhc:exon:6 |
| Zjn_sc00039.1 |
maker |
exon |
225983 |
227016 |
. |
+ |
. |
ID=Zjn_sc00039.1.g00520.1.am.mkhc:exon:7 |