Z. japonica Nagirizaki
Zjn_sc00038.1.g02270.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G48000.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 43 194 2e-56 63 25.1 30.3
Subject 243 32 162
Annot | Symbols: MYB112, AtMYB112 | myb domain protein 112 | chr1:17704269-17706377 REVERSE LENGTH=243
NR ref|XP_004962755.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 1 323 8e-79 76.2 48.7 56
Subject 294 1 271
Annot PREDICTED: transcription factor MYB108-like [Setaria italica]
IRGSP Os11t0684000-01_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 43 194 2e-65 73.8 29.5 32.1
Subject 285 29 159
Annot
Sbicolor Sobic.008G131400.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 36 194 5e-67 87.3 31.6 33.9
Subject 337 31 167
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00038.1.g02270.1.am.mk length: 386 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 4e-15 119-162
HMMSmart SM00717 SANT 1.8e-16 44-115
118-166
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 3.7e-24 46-120
121-167
superfamily SSF46689 Homeodomain-like 4e-10 91-178
36-118
IPR017877 Myb-like domain
ProfileScan PS50090 MYB_LIKE 9.547 40-113
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 23.832 114-168
no_ID  
HMMPanther PTHR10641 MYB-LIKE 1.8e-73 40-212
HMMPanther PTHR10641:SF199SUBFAMILY NOT 1.8e-73 40-212
Seg seg seg NA 2-18
27-37
196-216
222-230
235-248
367-378
Pseudomolecule
Chromosome Start End Strand
1662363206239451-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00038.1 maker_non_over exon 1732786 1732982 . - . ID=Zjn_sc00038.1.g02270.1.am.mk:exon:4
Zjn_sc00038.1 maker_non_over exon 1734267 1734811 . - . ID=Zjn_sc00038.1.g02270.1.am.mk:exon:3
Zjn_sc00038.1 maker_non_over exon 1735388 1735517 . - . ID=Zjn_sc00038.1.g02270.1.am.mk:exon:2
Zjn_sc00038.1 maker_non_over exon 1735629 1735917 . - . ID=Zjn_sc00038.1.g02270.1.am.mk:exon:1

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