Z. japonica Nagirizaki
Zjn_sc00037.1.g03630.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G79530.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 312 113 312 4e-96 135.3 56.4 59.3
Subject 422 194 422
Annot | Symbols: GAPCP-1 | glyceraldehyde-3-phosphate dehydrogenase of plastid 1 | chr1:29916232-29919088 REVERSE LENGTH=422
NR ref|XP_002451619.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 312 117 312 e-103 132.4 62.5 62.8
Subject 413 189 413
Annot hypothetical protein SORBIDRAFT_04g004750 [Sorghum bicolor] gi|241931450|gb|EES04595.1| hypothetical protein SORBIDRAFT_04g004750 [Sorghum bicolor]
IRGSP Os02t0171100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 312 117 312 e-106 131.7 62.2 62.5
Subject 411 187 411
Annot
Sbicolor Sobic.004G056400.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 312 117 312 e-106 132.4 62.5 62.8
Subject 413 189 413
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00037.1.g03630.1.sm.mkhc length: 312 aa.
IPR016040 NAD(P)-binding domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.720 no description 5.6e-12 76-114
115-157
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00044 Gp_dh_N 5.6e-07 78-116
117-150
HMMSmart SM00846 Glyceraldehyde 6.4e-17 77-151
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02800 Gp_dh_C 4.8e-57 145-288
IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR10836 GLYCERALDEHYDE 3.7e-163 57-309
no_ID  
Gene3D G3DSA:3.30.360.10 no description 1.2e-60 158-290
Seg seg seg NA 2-23
162-174
superfamily SSF51735 NAD(P)-binding 8.3e-29 77-177
superfamily SSF55347 Glyceraldehyde-3-phosphate 1.6e-62 145-289
Pseudomolecule
Chromosome Start End Strand
8-245547-240564+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00037.1 maker exon 1746674 1746847 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:13
Zjn_sc00037.1 maker exon 1746885 1747071 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:12
Zjn_sc00037.1 maker exon 1747160 1747249 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:11
Zjn_sc00037.1 maker exon 1747339 1747422 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:10
Zjn_sc00037.1 maker exon 1747928 1748034 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:9
Zjn_sc00037.1 maker exon 1748616 1748713 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:8
Zjn_sc00037.1 maker exon 1748783 1748843 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:7
Zjn_sc00037.1 maker exon 1749006 1749101 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:6
Zjn_sc00037.1 maker exon 1750535 1750635 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:5
Zjn_sc00037.1 maker exon 1750807 1750845 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:4
Zjn_sc00037.1 maker exon 1750938 1750990 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:3
Zjn_sc00037.1 maker exon 1751090 1751163 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:2
Zjn_sc00037.1 maker exon 1751577 1751657 . - . ID=Zjn_sc00037.1.g03630.1.sm.mkhc:exon:1

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