Z. japonica Nagirizaki
Zjn_sc00037.1.g03470.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G79440.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 358 84 358 e-114 147.5 62 69.3
Subject 528 201 526
Annot | Symbols: ALDH5F1, SSADH1, SSADH | aldehyde dehydrogenase 5F1 | chr1:29882525-29887275 REVERSE LENGTH=528
NR ref|XP_008643578.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 358 84 357 e-134 145.5 70.7 73.7
Subject 521 196 520
Annot PREDICTED: succinate semialdehyde dehydrogenase isoform X1 [Zea mays] gi|413935768|gb|AFW70319.1| succinate semialdehyde dehydrogenase [Zea mays]
IRGSP Os04t0464200-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 358 84 352 3e-56 141.1 34.9 48.3
Subject 505 166 487
Annot
Sbicolor Sobic.004G058600.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 358 84 357 e-136 147.2 71.8 74
Subject 527 202 526
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00037.1.g03470.1.sm.mkhc length: 358 aa.
IPR015590 Aldehyde dehydrogenase domain
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00171 Aldedh 7.3e-51 91-201
203-352
IPR016160 Aldehyde dehydrogenase, conserved site
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00687 ALDEHYDE_DEHYDR_GLU NA 179-186
IPR016161 Aldehyde/histidinol dehydrogenase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF53720 ALDH-like 3.4e-100 34-358
IPR016162 Aldehyde dehydrogenase, N-terminal
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.40.605.10 no description 1.9e-46 90-201
IPR016163 Aldehyde dehydrogenase, C-terminal
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.40.309.10 no description 8.5e-40 203-332
no_ID  
HMMPanther PTHR11699 ALDEHYDE 1.5e-154 92-358
HMMPanther PTHR11699:SF49 SUCCINATE 1.5e-154 92-358
Seg seg seg NA 6-21
188-199
Pseudomolecule
Chromosome Start End Strand
8-181546-175794+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00037.1 maker exon 1681904 1682036 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:15
Zjn_sc00037.1 maker exon 1682084 1682228 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:14
Zjn_sc00037.1 maker exon 1682304 1682381 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:13
Zjn_sc00037.1 maker exon 1682492 1682598 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:12
Zjn_sc00037.1 maker exon 1683026 1683111 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:11
Zjn_sc00037.1 maker exon 1683382 1683482 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:10
Zjn_sc00037.1 maker exon 1683715 1683747 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:9
Zjn_sc00037.1 maker exon 1683850 1683882 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:8
Zjn_sc00037.1 maker exon 1684621 1684698 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:7
Zjn_sc00037.1 maker exon 1685060 1685137 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:6
Zjn_sc00037.1 maker exon 1685269 1685334 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:5
Zjn_sc00037.1 maker exon 1685849 1685959 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:4
Zjn_sc00037.1 maker exon 1686451 1686513 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:3
Zjn_sc00037.1 maker exon 1687328 1687441 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:2
Zjn_sc00037.1 maker exon 1687561 1687656 . - . ID=Zjn_sc00037.1.g03470.1.sm.mkhc:exon:1

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