Z. japonica Nagirizaki
Zjn_sc00037.1.g01970.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G31810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 331 28 331 e-123 148.3 71 81.3
Subject 491 95 489
Annot | Symbols: | ACT domain-containing small subunit of acetolactate synthase protein | chr2:13524271-13528246 FORWARD LENGTH=491
NR ref|XP_004953051.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 331 28 331 e-146 147.4 85.2 89.7
Subject 488 92 488
Annot PREDICTED: acetolactate synthase small subunit 2, chloroplastic-like [Setaria italica]
IRGSP Os02t0608600-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 331 86 331 e-116 102.7 67.7 70.4
Subject 340 2 340
Annot
Sbicolor Sobic.004G210000.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 331 28 331 e-145 148.6 83.7 87.3
Subject 492 96 492
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00037.1.g01970.1.am.mkhc length: 331 aa.
IPR004789 Acetolactate synthase, small subunit
method AccNumber shortName E-value location
Molecular Function GO:0003984 acetolactate synthase activity    
Biological Process GO:0009082 branched-chain amino acid biosynthetic process    
HMMTigr TIGR00119 acolac_sm: 5.4e-23 28-120
230-316
IPR019455 Acetolactate synthase, small subunit, C-terminal
HMMPfam PF10369 ALS_ss_C 5.4e-26 242-316
no_ID  
BlastProDom PD002844 Q9FFF4_ARATH_Q9FFF4; 3e-11 28-91
199-231
Gene3D G3DSA:3.30.70.1150 no description 5.9e-27 252-321
Gene3D G3DSA:3.30.70.260 no description 2.9e-11 28-92
202-251
HMMPanther PTHR30239 ACETOLACTATE 3.6e-97 28-331
HMMPanther PTHR30239:SF0 ACETOLACTATE 3.6e-97 28-331
HMMPfam PF13710 ACT_5 8.9e-14 29-88
superfamily SSF55021 ACT-like 0.0044 237-321
14-97
93-116
Pseudomolecule
Chromosome Start End Strand
71366846913673072+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00037.1 maker exon 1074961 1075337 . - . ID=Zjn_sc00037.1.g01970.1.am.mkhc:exon:9
Zjn_sc00037.1 maker exon 1075746 1075811 . - . ID=Zjn_sc00037.1.g01970.1.am.mkhc:exon:8
Zjn_sc00037.1 maker exon 1076050 1076202 . - . ID=Zjn_sc00037.1.g01970.1.am.mkhc:exon:7
Zjn_sc00037.1 maker exon 1076483 1076587 . - . ID=Zjn_sc00037.1.g01970.1.am.mkhc:exon:6
Zjn_sc00037.1 maker exon 1076783 1076869 . - . ID=Zjn_sc00037.1.g01970.1.am.mkhc:exon:5
Zjn_sc00037.1 maker exon 1077730 1077885 . - . ID=Zjn_sc00037.1.g01970.1.am.mkhc:exon:4
Zjn_sc00037.1 maker exon 1078312 1078395 . - . ID=Zjn_sc00037.1.g01970.1.am.mkhc:exon:3
Zjn_sc00037.1 maker exon 1079232 1079413 . - . ID=Zjn_sc00037.1.g01970.1.am.mkhc:exon:2
Zjn_sc00037.1 maker exon 1079486 1079564 . - . ID=Zjn_sc00037.1.g01970.1.am.mkhc:exon:1

Top