Z. japonica Nagirizaki
Zjn_sc00036.1.g03440.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G53450.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 213 407 1e-65 50.2 30.4 33.4
Subject 215 42 205
Annot | Symbols: | Putative lysine decarboxylase family protein | chr3:19812977-19815430 REVERSE LENGTH=215
NR ref|XP_006655653.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 117 427 8e-91 58.6 43 48.1
Subject 251 19 251
Annot PREDICTED: probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL8-like [Oryza brachyantha]
IRGSP Os01t0588900-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 174 427 6e-88 56.5 40.4 43.7
Subject 242 29 242
Annot
Sbicolor Sobic.003G202200.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 213 427 2e-89 58.6 40 41.1
Subject 251 65 251
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00036.1.g03440.1.am.mkhc length: 428 aa.
IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
method AccNumber shortName E-value location
HMMPfam PF03641 Lysine_decarbox 5.6e-40 272-392
HMMTigr TIGR00730 TIGR00730: 6.2e-45 213-396
no_ID  
Gene3D G3DSA:3.40.50.450 no description 5.8e-53 212-247
276-404
HMMPanther PTHR31223 FAMILY 2.6e-92 93-426
Seg seg seg NA 53-74
79-97
100-115
superfamily SSF102405 MoCo 8e-42 124-395
Pseudomolecule
Chromosome Start End Strand
51080611110811341-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00036.1 maker exon 1990149 1990261 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:1
Zjn_sc00036.1 maker exon 1991245 1991584 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:2
Zjn_sc00036.1 maker exon 1991683 1991865 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:3
Zjn_sc00036.1 maker exon 1992007 1992104 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:4
Zjn_sc00036.1 maker exon 1992171 1992272 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:5
Zjn_sc00036.1 maker exon 1992598 1992628 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:6
Zjn_sc00036.1 maker exon 1993399 1993498 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:7
Zjn_sc00036.1 maker exon 1993582 1993652 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:8
Zjn_sc00036.1 maker exon 1994439 1994582 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:9
Zjn_sc00036.1 maker exon 1994703 1995379 . + . ID=Zjn_sc00036.1.g03440.1.am.mkhc:exon:10

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