Z. japonica Nagirizaki
Zjn_sc00036.1.g01210.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G14740.4 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
223 |
20 |
221 |
2e-59 |
148 |
51.6 |
63.2 |
| Subject |
330 |
99 |
319 |
|
| Annot |
| Symbols: CA2, CA18, BETA CA2 | carbonic anhydrase 2 | chr5:4758257-4762382 FORWARD LENGTH=330 |
| NR |
ref|XP_012701706.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
223 |
41 |
221 |
1e-85 |
200.9 |
69.1 |
75.8 |
| Subject |
448 |
44 |
243 |
|
| Annot |
PREDICTED: LOW QUALITY PROTEIN: carbonic anhydrase, chloroplastic [Setaria italica] |
| IRGSP |
Os01t0639900-01_chr01_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
223 |
46 |
221 |
1e-80 |
122 |
64.1 |
70.9 |
| Subject |
272 |
77 |
271 |
|
| Annot |
|
| Sbicolor |
Sobic.003G234200.4.p|Chr03|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
223 |
1 |
221 |
6e-90 |
110.3 |
76.7 |
85.7 |
| Subject |
246 |
1 |
245 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00036.1.g01210.1.sm.mkhc |
length: 223 aa. |
| IPR001765 |
Carbonic anhydrase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Gene3D |
G3DSA:3.40.1050.10 |
no description |
7.4e-58 |
37-221 |
| HMMPanther |
PTHR11002 |
FAMILY |
7.6e-57 |
34-221 |
| HMMPfam |
PF00484 |
Pro_CA |
1.6e-34 |
77-216 |
| HMMSmart |
SM00947 |
Carbonic |
3.6e-49 |
70-221 |
| superfamily |
SSF53056 |
beta-carbonic |
1.3e-57 |
5-221 |
| IPR015892 |
Carbonic anhydrase, prokaryotic-like, conserved site |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Biological Process |
GO:0015976 |
carbon utilization |
|
|
| PatternScan |
PS00705 |
PROK_CO2_ANHYDRASE_2 |
NA |
126-146 |
| no_ID |
|
| HMMPanther |
PTHR11002:SF1 |
SUBFAMILY |
7.6e-57 |
34-221 |
| Seg |
seg |
seg |
NA |
26-40 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 5 | 12244108 | 12248747 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00036.1 |
maker |
exon |
552743 |
552794 |
. |
- |
. |
ID=Zjn_sc00036.1.g01210.1.sm.mkhc:exon:9 |
| Zjn_sc00036.1 |
maker |
exon |
552816 |
553137 |
. |
- |
. |
ID=Zjn_sc00036.1.g01210.1.sm.mkhc:exon:8 |
| Zjn_sc00036.1 |
maker |
exon |
553385 |
553433 |
. |
- |
. |
ID=Zjn_sc00036.1.g01210.1.sm.mkhc:exon:7 |
| Zjn_sc00036.1 |
maker |
exon |
553566 |
553705 |
. |
- |
. |
ID=Zjn_sc00036.1.g01210.1.sm.mkhc:exon:6 |
| Zjn_sc00036.1 |
maker |
exon |
553798 |
553914 |
. |
- |
. |
ID=Zjn_sc00036.1.g01210.1.sm.mkhc:exon:5 |
| Zjn_sc00036.1 |
maker |
exon |
555010 |
555058 |
. |
- |
. |
ID=Zjn_sc00036.1.g01210.1.sm.mkhc:exon:4 |
| Zjn_sc00036.1 |
maker |
exon |
555146 |
555207 |
. |
- |
. |
ID=Zjn_sc00036.1.g01210.1.sm.mkhc:exon:3 |
| Zjn_sc00036.1 |
maker |
exon |
555494 |
555667 |
. |
- |
. |
ID=Zjn_sc00036.1.g01210.1.sm.mkhc:exon:2 |
| Zjn_sc00036.1 |
maker |
exon |
557314 |
557382 |
. |
- |
. |
ID=Zjn_sc00036.1.g01210.1.sm.mkhc:exon:1 |