Z. japonica Nagirizaki
Zjn_sc00036.1.g01180.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT3G01500.3 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
172 |
1 |
163 |
2e-43 |
195.3 |
52.9 |
64.5 |
| Subject |
336 |
163 |
324 |
|
| Annot |
| Symbols: CA1 | carbonic anhydrase 1 | chr3:195173-197873 REVERSE LENGTH=336 |
| NR |
ref|NP_001150123.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
172 |
1 |
164 |
1e-57 |
116.3 |
70.3 |
76.7 |
| Subject |
200 |
37 |
199 |
|
| Annot |
carbonic anhydrase [Zea mays] gi|195636930|gb|ACG37933.1| carbonic anhydrase [Zea mays] |
| IRGSP |
Os01t0639900-01_chr01_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
172 |
1 |
164 |
6e-56 |
158.1 |
65.1 |
74.4 |
| Subject |
272 |
109 |
271 |
|
| Annot |
|
| Sbicolor |
Sobic.003G234500.1.p|Chr03|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
172 |
1 |
164 |
2e-58 |
117.4 |
68.6 |
75.6 |
| Subject |
202 |
39 |
201 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00036.1.g01180.1.sm.mk |
length: 172 aa. |
| IPR001765 |
Carbonic anhydrase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Gene3D |
G3DSA:3.40.1050.10 |
no description |
3.9e-43 |
1-164 |
| HMMPanther |
PTHR11002 |
FAMILY |
4.5e-39 |
1-164 |
| HMMPfam |
PF00484 |
Pro_CA |
3.2e-36 |
1-160 |
| HMMSmart |
SM00947 |
Carbonic |
1.7e-40 |
1-164 |
| superfamily |
SSF53056 |
beta-carbonic |
3e-43 |
1-164 |
| IPR015892 |
Carbonic anhydrase, prokaryotic-like, conserved site |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Biological Process |
GO:0015976 |
carbon utilization |
|
|
| PatternScan |
PS00704 |
PROK_CO2_ANHYDRASE_1 |
NA |
5-12 |
| PatternScan |
PS00705 |
PROK_CO2_ANHYDRASE_2 |
NA |
47-67 |
| no_ID |
|
| HMMPanther |
PTHR11002:SF1 |
SUBFAMILY |
4.5e-39 |
1-164 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 5 | 12260114 | 12260895 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00036.1 |
maker_non_over |
exon |
540595 |
540744 |
. |
- |
. |
ID=Zjn_sc00036.1.g01180.1.sm.mk:exon:4 |
| Zjn_sc00036.1 |
maker_non_over |
exon |
540840 |
540946 |
. |
- |
. |
ID=Zjn_sc00036.1.g01180.1.sm.mk:exon:3 |
| Zjn_sc00036.1 |
maker_non_over |
exon |
541030 |
541183 |
. |
- |
. |
ID=Zjn_sc00036.1.g01180.1.sm.mk:exon:2 |
| Zjn_sc00036.1 |
maker_non_over |
exon |
541269 |
541376 |
. |
- |
. |
ID=Zjn_sc00036.1.g01180.1.sm.mk:exon:1 |