Z. japonica Nagirizaki
Zjn_sc00036.1.g01170.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G14740.5 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 145 45 140 1e-18 213.8 32.4 40.7
Subject 310 112 197
Annot | Symbols: CA2, CA18, BETA CA2 | carbonic anhydrase 2 | chr5:4758257-4762315 FORWARD LENGTH=310
NR ref|XP_012701705.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 145 8 138 1e-34 172.4 53.1 61.4
Subject 250 12 124
Annot PREDICTED: carbonic anhydrase, chloroplastic-like [Setaria italica]
IRGSP Os01t0640000-00_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 145 6 138 1e-24 163.4 45.5 57.9
Subject 237 10 144
Annot
Sbicolor Sobic.003G234600.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 145 8 138 2e-32 176.6 51 57.2
Subject 256 19 130
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00036.1.g01170.1.sm.mk length: 145 aa.
IPR001765 Carbonic anhydrase
method AccNumber shortName E-value location
Molecular Function GO:0004089 carbonate dehydratase activity    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.40.1050.10 no description 3.6e-16 56-140
HMMPanther PTHR11002 FAMILY 7.3e-15 55-145
HMMPfam PF00484 Pro_CA 2.6e-06 101-141
superfamily SSF53056 beta-carbonic 3.9e-14 55-145
no_ID  
HMMPanther PTHR11002:SF1 SUBFAMILY 7.3e-15 55-145
Pseudomolecule
Chromosome Start End Strand
51226163212262811+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00036.1 maker_non_over exon 538679 538819 . - . ID=Zjn_sc00036.1.g01170.1.sm.mk:exon:4
Zjn_sc00036.1 maker_non_over exon 539407 539485 . - . ID=Zjn_sc00036.1.g01170.1.sm.mk:exon:3
Zjn_sc00036.1 maker_non_over exon 539553 539614 . - . ID=Zjn_sc00036.1.g01170.1.sm.mk:exon:2
Zjn_sc00036.1 maker_non_over exon 539703 539858 . - . ID=Zjn_sc00036.1.g01170.1.sm.mk:exon:1

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