Z. japonica Nagirizaki
Zjn_sc00035.1.g02050.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G76430.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 590 46 543 e-153 90.2 48.1 60.7
Subject 532 15 513
Annot | Symbols: PHT1;9 | phosphate transporter 1;9 | chr1:28679115-28681874 REVERSE LENGTH=532
NR ref|XP_002436966.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 590 47 590 0.0 97.1 74.2 79.2
Subject 573 16 573
Annot hypothetical protein SORBIDRAFT_10g012710 [Sorghum bicolor] gi|241915189|gb|EER88333.1| hypothetical protein SORBIDRAFT_10g012710 [Sorghum bicolor]
IRGSP Os06t0325200-00_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 590 47 590 0.0 93.6 70.2 76.3
Subject 552 16 552
Annot
Sbicolor Sobic.010G133300.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 590 47 590 0.0 97.1 74.2 79.2
Subject 573 16 573
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00035.1.g02050.1.am.mk length: 590 aa.
IPR005828 General substrate transporter
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0022857 transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00083 Sugar_tr 1e-48 88-541
IPR005829 Sugar transporter, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
PatternScan PS00216 SUGAR_TRANSPORT_1 NA 387-403
PatternScan PS00217 SUGAR_TRANSPORT_2 NA 154-179
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 2.6e-63 1-541
IPR020846 Major facilitator superfamily domain
ProfileScan PS50850 MFS 30.625 53-533
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 1.1e-13 82-254
377-541
HMMPanther PTHR24064 FAMILY 1.9e-171 14-568
HMMPanther PTHR24064:SF0 SUBFAMILY 1.9e-171 14-568
Seg seg seg NA 72-85
86-110
127-138
196-207
511-522
Pseudomolecule
Chromosome Start End Strand
1948848144894494+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00035.1 maker_non_over exon 1990625 1991636 . - . ID=Zjn_sc00035.1.g02050.1.am.mk:exon:6
Zjn_sc00035.1 maker_non_over exon 1999389 1999930 . - . ID=Zjn_sc00035.1.g02050.1.am.mk:exon:5
Zjn_sc00035.1 maker_non_over exon 1999979 2000056 . - . ID=Zjn_sc00035.1.g02050.1.am.mk:exon:4
Zjn_sc00035.1 maker_non_over exon 2000090 2000127 . - . ID=Zjn_sc00035.1.g02050.1.am.mk:exon:3
Zjn_sc00035.1 maker_non_over exon 2000164 2000258 . - . ID=Zjn_sc00035.1.g02050.1.am.mk:exon:2
Zjn_sc00035.1 maker_non_over exon 2000298 2000305 . - . ID=Zjn_sc00035.1.g02050.1.am.mk:exon:1

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