Z. japonica Nagirizaki
Zjn_sc00034.1.g04830.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G02500.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 128 20 127 7e-48 235.9 68.8 77.3
Subject 302 193 300
Annot | Symbols: ISPD, ATMEPCT, MCT | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:671054-673124 REVERSE LENGTH=302
NR dbj|BAJ91237.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 128 20 128 1e-54 232.8 82 84.4
Subject 298 190 298
Annot predicted protein [Hordeum vulgare subsp. vulgare]
IRGSP Os01t0887100-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 128 20 128 1e-54 135.9 79.7 82
Subject 174 66 174
Annot
Sbicolor Sobic.003G381900.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 128 20 128 1e-56 230.5 82 82.8
Subject 295 187 295
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00034.1.g04830.1.am.mkhc length: 128 aa.
IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF01128 IspD 3.9e-29 26-126
no_ID  
Gene3D G3DSA:3.90.550.10 no description 1.5e-33 20-127
HMMPanther PTHR32125 FAMILY 1.1e-24 22-127
HMMPanther PTHR32125:SF0 SUBFAMILY 1.1e-24 22-127
superfamily SSF53448 Nucleotide-diphospho-sugar 0.0013 27-127
1-19
Pseudomolecule
Chromosome Start End Strand
61771022217712683+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00034.1 maker exon 1966972 1967353 . - . ID=Zjn_sc00034.1.g04830.1.am.mkhc:exon:7
Zjn_sc00034.1 maker exon 1967438 1967528 . - . ID=Zjn_sc00034.1.g04830.1.am.mkhc:exon:6
Zjn_sc00034.1 maker exon 1967608 1967654 . - . ID=Zjn_sc00034.1.g04830.1.am.mkhc:exon:5
Zjn_sc00034.1 maker exon 1967768 1967836 . - . ID=Zjn_sc00034.1.g04830.1.am.mkhc:exon:4
Zjn_sc00034.1 maker exon 1967970 1968038 . - . ID=Zjn_sc00034.1.g04830.1.am.mkhc:exon:3
Zjn_sc00034.1 maker exon 1969179 1969247 . - . ID=Zjn_sc00034.1.g04830.1.am.mkhc:exon:2
Zjn_sc00034.1 maker exon 1969364 1969433 . - . ID=Zjn_sc00034.1.g04830.1.am.mkhc:exon:1

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