Z. japonica Nagirizaki
Zjn_sc00034.1.g03140.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G51340.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 534 66 529 e-136 96.4 50.7 63.5
Subject 515 13 461
Annot | Symbols: | MATE efflux family protein | chr1:19032021-19034681 FORWARD LENGTH=515
NR gb|ABS89149.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 534 1 529 0.0 112.4 75.1 83.5
Subject 600 1 546
Annot MATE [Sorghum bicolor]
IRGSP Os01t0919100-00_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 534 3 529 0.0 113.9 71 77.9
Subject 608 19 554
Annot
Sbicolor Sobic.003G403000.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 534 1 529 0.0 112.4 75.1 83.5
Subject 600 1 546
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00034.1.g03140.1.am.mk length: 534 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 2.3e-12 218-326
388-529
HMMTigr TIGR00797 matE: 7.4e-110 95-529
no_ID  
HMMPanther PTHR11206 MULTIDRUG 1.2e-170 21-529
HMMPanther PTHR11206:SF47 MATE 1.2e-170 21-529
Seg seg seg NA 15-39
49-64
120-131
160-171
371-386
456-467
Pseudomolecule
Chromosome Start End Strand
61841830518420490+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00034.1 maker_non_over exon 1259165 1259278 . - . ID=Zjn_sc00034.1.g03140.1.am.mk:exon:7
Zjn_sc00034.1 maker_non_over exon 1259361 1259549 . - . ID=Zjn_sc00034.1.g03140.1.am.mk:exon:6
Zjn_sc00034.1 maker_non_over exon 1259663 1259826 . - . ID=Zjn_sc00034.1.g03140.1.am.mk:exon:5
Zjn_sc00034.1 maker_non_over exon 1259922 1260022 . - . ID=Zjn_sc00034.1.g03140.1.am.mk:exon:4
Zjn_sc00034.1 maker_non_over exon 1260103 1260199 . - . ID=Zjn_sc00034.1.g03140.1.am.mk:exon:3
Zjn_sc00034.1 maker_non_over exon 1260308 1260443 . - . ID=Zjn_sc00034.1.g03140.1.am.mk:exon:2
Zjn_sc00034.1 maker_non_over exon 1260547 1261350 . - . ID=Zjn_sc00034.1.g03140.1.am.mk:exon:1

Top