Z. japonica Nagirizaki
Zjn_sc00034.1.g03100.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G04920.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1036 1 1034 0.0 102.5 66.8 80
Subject 1062 1 1062
Annot | Symbols: ATSPS3F, SPS3F | sucrose phosphate synthase 3F | chr1:1391674-1395756 REVERSE LENGTH=1062
NR ref|XP_002458991.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1036 1 1036 0.0 104.3 89.2 94.3
Subject 1081 1 1081
Annot hypothetical protein SORBIDRAFT_03g043900 [Sorghum bicolor] gi|241930966|gb|EES04111.1| hypothetical protein SORBIDRAFT_03g043900 [Sorghum bicolor]
IRGSP Os08t0301500-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1036 1 1015 0.0 102.9 53.6 70.8
Subject 1066 1 1046
Annot
Sbicolor Sobic.003G403300.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1036 1 1036 0.0 104.3 89.2 94.3
Subject 1081 1 1081
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00034.1.g03100.1.sm.mkhc length: 1036 aa.
IPR001296 Glycosyl transferase, family 1
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF00534 Glycos_transf_1 1.6e-09 567-625
IPR006380 Sucrose-phosphate synthase
HMMPfam PF05116 S6PP 1.4e-16 781-985
no_ID  
Coil coil coiled-coil NA 119-140
Gene3D G3DSA:3.40.50.2000 no description 4.2e-06 567-626
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 0 49-677
HMMPanther PTHR12526:SF55 SUCROSE-PHOSPHATE 0 49-677
HMMPfam PF13579 Glyco_trans_4_4 2.1e-08 210-406
Seg seg seg NA 18-33
125-135
458-474
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 9.2e-47 201-647
Pseudomolecule
Chromosome Start End Strand
61842320918428365-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00034.1 maker exon 1251290 1251628 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:1
Zjn_sc00034.1 maker exon 1252216 1252448 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:2
Zjn_sc00034.1 maker exon 1252660 1252723 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:3
Zjn_sc00034.1 maker exon 1252806 1253495 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:4
Zjn_sc00034.1 maker exon 1253619 1253750 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:5
Zjn_sc00034.1 maker exon 1253845 1253976 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:6
Zjn_sc00034.1 maker exon 1254087 1254194 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:7
Zjn_sc00034.1 maker exon 1254498 1254560 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:8
Zjn_sc00034.1 maker exon 1254677 1255609 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:9
Zjn_sc00034.1 maker exon 1255685 1255812 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:10
Zjn_sc00034.1 maker exon 1255895 1256446 . + . ID=Zjn_sc00034.1.g03100.1.sm.mkhc:exon:11

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